Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06355 and RS_RS06360 are separated by 285 nucleotidesRS_RS06360 and RS_RS06365 are separated by 139 nucleotidesRS_RS06365 and RS_RS06370 are separated by 70 nucleotidesRS_RS06370 and RS_RS06375 are separated by 91 nucleotides RS_RS06355: RS_RS06355 - glycerophosphodiester phosphodiesterase, at 1,347,576 to 1,348,334 _RS06355 RS_RS06360: RS_RS06360 - 2-oxoglutarate dehydrogenase E1 component, at 1,348,620 to 1,351,481 _RS06360 RS_RS06365: RS_RS06365 - dihydrolipoyllysine-residue succinyltransferase, at 1,351,621 to 1,352,877 _RS06365 RS_RS06370: RS_RS06370 - dihydrolipoyl dehydrogenase, at 1,352,948 to 1,354,384 _RS06370 RS_RS06375: RS_RS06375 - cell division protein ZapE, at 1,354,476 to 1,355,573 _RS06375
Group Condition RS_RS06355 RS_RS06360 RS_RS06365 RS_RS06370 RS_RS06375
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.5 N.D. N.D. N.D. -4.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.9 N.D. N.D. N.D. -4.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -2.0 N.D. N.D. N.D. -3.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.8 N.D. N.D. N.D. -4.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. N.D. N.D. -4.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. N.D. N.D. -4.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 N.D. N.D. N.D. -4.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.3 N.D. N.D. N.D. -3.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. N.D. -4.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.9 N.D. N.D. N.D. -3.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.0 N.D. N.D. N.D. -2.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 N.D. N.D. N.D. -4.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 N.D. N.D. N.D. -3.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. N.D. -3.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. N.D. -3.4
carbon source L-Glutamic (C) -1.6 N.D. N.D. N.D. -1.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 N.D. N.D. N.D. -2.5
carbon source pyruvate (C) -1.4 N.D. N.D. N.D. -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 N.D. N.D. N.D. -2.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 N.D. N.D. N.D. -3.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.7 N.D. N.D. N.D. -1.9
carbon source D,L-Malic Acid (C) -1.0 N.D. N.D. N.D. -1.5
carbon source D-Glucose (C) -2.0 N.D. N.D. N.D. -0.5
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 N.D. N.D. N.D. -2.6
carbon source D-Galactose (C) -2.2 N.D. N.D. N.D. -0.1
cpg CPG +0.1 N.D. N.D. N.D. -2.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 N.D. N.D. N.D. -2.2
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.1 N.D. N.D. N.D. -1.8
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +1.2 N.D. N.D. N.D. -1.6
carbon source Sucrose (C) +0.7 N.D. N.D. N.D. +1.7
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