Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06350 and RS_RS06355 overlap by 4 nucleotidesRS_RS06355 and RS_RS06360 are separated by 285 nucleotidesRS_RS06360 and RS_RS06365 are separated by 139 nucleotidesRS_RS06365 and RS_RS06370 are separated by 70 nucleotides RS_RS06350: RS_RS06350 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 1,346,482 to 1,347,579 _RS06350 RS_RS06355: RS_RS06355 - glycerophosphodiester phosphodiesterase, at 1,347,576 to 1,348,334 _RS06355 RS_RS06360: RS_RS06360 - 2-oxoglutarate dehydrogenase E1 component, at 1,348,620 to 1,351,481 _RS06360 RS_RS06365: RS_RS06365 - dihydrolipoyllysine-residue succinyltransferase, at 1,351,621 to 1,352,877 _RS06365 RS_RS06370: RS_RS06370 - dihydrolipoyl dehydrogenase, at 1,352,948 to 1,354,384 _RS06370
Group Condition RS_RS06350 RS_RS06355 RS_RS06360 RS_RS06365 RS_RS06370
carbon source pyruvate (C) -1.3 -1.4 N.D. N.D. N.D.
carbon source D-Galactose (C) -0.5 -2.2 N.D. N.D. N.D.
carbon source D-Glucose (C) -0.1 -2.0 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 -1.9 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.1 -2.0 N.D. N.D. N.D.
carbon source L-Glutamic (C) -0.2 -1.6 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.3 -1.5 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.2 -1.3 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.9 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.2 -1.0 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days -0.3 -0.8 N.D. N.D. N.D.
carbon source L-Aspartic Acid (C) -0.7 -0.3 N.D. N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.9 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 -0.8 N.D. N.D. N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.7 N.D. N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.7 N.D. N.D. N.D.
cpg no stress control CPG no stress control -0.3 -0.5 N.D. N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.3 -0.4 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.4 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) +0.4 -1.0 N.D. N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.2 -0.7 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.2 -0.6 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 -0.5 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 +0.3 N.D. N.D. N.D.
carbon source L-Alanine (C) -0.4 +0.3 N.D. N.D. N.D.
carbon source succinate (C) +0.1 +0.7 N.D. N.D. N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 +1.1 N.D. N.D. N.D.
carbon source Sucrose (C) +0.2 +0.7 N.D. N.D. N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +1.1 N.D. N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.2 +1.2 N.D. N.D. N.D.
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