Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS06305 and RS_RS06310 are separated by 165 nucleotidesRS_RS06310 and RS_RS06315 are separated by 4 nucleotidesRS_RS06315 and RS_RS06320 are separated by 51 nucleotidesRS_RS06320 and RS_RS06325 are separated by 104 nucleotides RS_RS06305: RS_RS06305 - type I glutamate--ammonia ligase, at 1,336,769 to 1,338,184 _RS06305 RS_RS06310: RS_RS06310 - hypothetical protein, at 1,338,350 to 1,338,862 _RS06310 RS_RS06315: RS_RS06315 - PAS domain-containing sensor histidine kinase, at 1,338,867 to 1,340,069 _RS06315 RS_RS06320: RS_RS06320 - nitrogen regulation protein NR(I), at 1,340,121 to 1,341,629 _RS06320 RS_RS06325: RS_RS06325 - hypothetical protein, at 1,341,734 to 1,342,060 _RS06325
Group Condition RS_RS06305 RS_RS06310 RS_RS06315 RS_RS06320 RS_RS06325
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -2.1 -1.1 N.D. -0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -2.0 -0.4 N.D. -0.9
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.2 -1.8 N.D. -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -3.0 +0.2 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -2.8 +0.4 N.D. -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.6 -1.0 N.D. -1.0
carbon source L-Alanine (C) N.D. -0.4 -2.6 N.D. +0.5
carbon source L-Aspartic Acid (C) N.D. -1.9 -0.6 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -2.3 -0.2 N.D. -0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.0 -0.5 N.D. -0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.9 -1.5 N.D. +0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.6 -0.7 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -1.2 -1.0 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. -2.1 +0.1 N.D. +0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 -0.9 N.D. +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.8 -1.2 N.D. +0.3
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.0 -1.0 N.D. +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. -1.7 +0.4 N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.6 -2.0 N.D. +0.5
carbon source pyruvate (C) N.D. -2.0 +0.5 N.D. +0.7
carbon source D-Glucose (C) N.D. -1.6 +0.4 N.D. +0.5
carbon source L-Aspartic Acid (C) N.D. +0.8 -0.6 N.D. -0.7
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.9 -0.7 N.D. +1.2
carbon source D-Galactose (C) N.D. -1.1 -0.1 N.D. +1.0
carbon source L-Glutamine (C) N.D. +0.7 -1.2 N.D. +0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.5 +0.2 N.D. -1.1
carbon source D-Glucose (C) N.D. +0.7 -0.5 N.D. +1.0
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.6 +0.6 N.D. +1.4
carbon source succinate (C) N.D. +1.0 +0.3 N.D. +1.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.2 +2.2 N.D. +0.6
remove
RS_RS06305
plot		 remove
RS_RS06310
plot		 remove
RS_RS06315		 remove
RS_RS06320
plot		 remove
RS_RS06325
plot