Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06255 and RS_RS06260 are separated by 131 nucleotidesRS_RS06260 and RS_RS06265 are separated by 31 nucleotidesRS_RS06265 and RS_RS06270 are separated by 82 nucleotidesRS_RS06270 and RS_RS06275 are separated by 143 nucleotides RS_RS06255: RS_RS06255 - gfo/Idh/MocA family oxidoreductase, at 1,323,318 to 1,324,490 _RS06255 RS_RS06260: RS_RS06260 - MurR/RpiR family transcriptional regulator, at 1,324,622 to 1,325,500 _RS06260 RS_RS06265: RS_RS06265 - amino-acid N-acetyltransferase, at 1,325,532 to 1,326,929 _RS06265 RS_RS06270: RS_RS06270 - ATP-dependent RNA helicase HrpA, at 1,327,012 to 1,331,007 _RS06270 RS_RS06275: RS_RS06275 - YncE family protein, at 1,331,151 to 1,332,143 _RS06275
Group Condition RS_RS06255 RS_RS06260 RS_RS06265 RS_RS06270 RS_RS06275
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.4 N.D. N.D. -4.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.3 N.D. N.D. -3.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.2 N.D. N.D. -3.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 N.D. N.D. -2.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 N.D. N.D. -2.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.2 N.D. N.D. -2.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 N.D. N.D. -1.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 N.D. N.D. -1.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.7 N.D. N.D. -0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.6 N.D. N.D. -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 N.D. N.D. -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.5 N.D. N.D. -0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days -0.2 N.D. N.D. -0.4 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.7 N.D. N.D. +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 N.D. N.D. -0.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 N.D. N.D. -0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.3 N.D. N.D. -0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.2 N.D. N.D. -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.4 N.D. N.D. -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. N.D. +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 N.D. N.D. +0.2 N.D.
carbon source L-Alanine (C) +0.5 N.D. N.D. +0.1 N.D.
carbon source D-Glucose (C) +0.4 N.D. N.D. +0.2 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 N.D. N.D. +0.4 N.D.
carbon source D,L-Malic Acid (C) +0.2 N.D. N.D. +0.4 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 N.D. N.D. +0.4 N.D.
carbon source Sucrose (C) +0.3 N.D. N.D. +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 N.D. N.D. +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.4 N.D. N.D. +0.3 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 N.D. N.D. +0.1 N.D.
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