Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06065 and RS_RS06070 are separated by 43 nucleotidesRS_RS06070 and RS_RS06075 overlap by 4 nucleotidesRS_RS06075 and RS_RS06080 overlap by 8 nucleotidesRS_RS06080 and RS_RS06085 are separated by 54 nucleotides RS_RS06065: RS_RS06065 - nucleoside-diphosphate kinase, at 1,280,175 to 1,280,600 _RS06065 RS_RS06070: RS_RS06070 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 1,280,644 to 1,281,795 _RS06070 RS_RS06075: RS_RS06075 - type IV pilus biogenesis/stability protein PilW, at 1,281,792 to 1,282,583 _RS06075 RS_RS06080: RS_RS06080 - DUF4115 domain-containing protein, at 1,282,576 to 1,283,679 _RS06080 RS_RS06085: RS_RS06085 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), at 1,283,734 to 1,285,029 _RS06085
Group Condition RS_RS06065 RS_RS06070 RS_RS06075 RS_RS06080 RS_RS06085
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -2.0 N.D. N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.9 N.D. N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.9 N.D. N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -1.9 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. -1.8 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -1.6 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -1.5 N.D. N.D. N.D.
cpg CPG N.D. -1.4 N.D. N.D. N.D.
carbon source pyruvate (C) N.D. -1.4 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -1.4 N.D. N.D. N.D.
carbon source L-Aspartic Acid (C) N.D. -1.3 N.D. N.D. N.D.
carbon source L-Glutamine (C) N.D. -1.2 N.D. N.D. N.D.
carbon source L-Alanine (C) N.D. -1.2 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -1.2 N.D. N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.2 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -1.1 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -1.1 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. -1.0 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -1.0 N.D. N.D. N.D.
m63_quarter_strength M63_quarter_strength N.D. -0.9 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.9 N.D. N.D. N.D.
carbon source D-Galactose (C) N.D. -0.8 N.D. N.D. N.D.
cpg CPG N.D. -0.8 N.D. N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -0.8 N.D. N.D. N.D.
carbon source L-Glutamic (C) N.D. -0.8 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -0.8 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. +0.8 N.D. N.D. N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.0 N.D. N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.7 N.D. N.D. N.D.
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