Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS06040 and RS_RS06045 are separated by 8 nucleotidesRS_RS06045 and RS_RS06050 are separated by 33 nucleotidesRS_RS06050 and RS_RS06055 are separated by 154 nucleotidesRS_RS06055 and RS_RS06060 are separated by 84 nucleotides RS_RS06040: RS_RS06040 - LysM peptidoglycan-binding domain-containing protein, at 1,274,641 to 1,275,468 _RS06040 RS_RS06045: RS_RS06045 - RNA polymerase sigma factor RpoS, at 1,275,477 to 1,276,610 _RS06045 RS_RS06050: RS_RS06050 - EEP domain-containing protein, at 1,276,644 to 1,277,513 _RS06050 RS_RS06055: RS_RS06055 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 1,277,668 to 1,279,020 _RS06055 RS_RS06060: RS_RS06060 - BAX inhibitor (BI)-1/YccA family protein, at 1,279,105 to 1,279,806 _RS06060
Group Condition RS_RS06040 RS_RS06045 RS_RS06050 RS_RS06055 RS_RS06060
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.7 -7.6 -0.6 -0.3 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.4 -9.2 +0.5 -0.0 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.8 -8.5 +0.1 +0.1 -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.6 -3.0 +0.3 -0.3 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.0 -2.9 +0.8 -0.2 +0.3
carbon source D-Glucose (C) -1.5 +2.0 +0.7 -0.4 -1.4
carbon source L-Aspartic Acid (C) -1.8 +1.7 +0.3 +0.4 -1.0
carbon source D-Glucose (C) -1.1 +2.1 +0.5 -1.0 -0.7
carbon source D-Galactose (C) -0.9 +3.2 +0.4 -0.7 -1.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +4.7 -1.1 -0.6 -1.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +4.6 +0.0 -0.3 -0.7
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 +3.8 +0.4 -0.2 -0.5
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +4.9 -0.2 -0.2 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.0 +3.8 +0.0 -0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 +3.2 +0.5 -0.6 +0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.3 +3.2 +0.1 +0.6 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 +3.3 +0.4 -0.4 +0.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +4.6 +0.1 +0.2 -0.0
carbon source D-Galactose (C) +0.0 +3.2 +2.0 -0.2 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.3 +3.7 +0.5 -0.1 -0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +6.4 -0.4 -1.0 +1.0
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +2.1 +4.6 +0.4 +0.1 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 +5.0 +0.3 +0.1 +0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +6.9 +0.1 -0.2 +0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.5 +6.1 +0.2 +0.1 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.9 +5.9 +0.4 -0.3 +0.3
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +2.1 +5.4 +0.0 +0.1 +1.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +3.4 +5.8 -0.5 -0.1 +0.3
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.8 +6.8 +0.0 -0.1 +0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.7 +7.3 -0.2 -0.1 +1.4
remove
RS_RS06040
plot		 remove
RS_RS06045
plot		 remove
RS_RS06050		 remove
RS_RS06055
plot		 remove
RS_RS06060
plot