Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS05975 and RS_RS05980 are separated by 109 nucleotidesRS_RS05980 and RS_RS05985 are separated by 22 nucleotidesRS_RS05985 and RS_RS05990 are separated by 78 nucleotidesRS_RS05990 and RS_RS05995 are separated by 32 nucleotides RS_RS05975: RS_RS05975 - YbaB/EbfC family nucleoid-associated protein, at 1,262,060 to 1,262,407 _RS05975 RS_RS05980: RS_RS05980 - recombination protein RecR, at 1,262,517 to 1,263,137 _RS05980 RS_RS05985: RS_RS05985 - carbohydrate porin, at 1,263,160 to 1,264,665 _RS05985 RS_RS05990: RS_RS05990 - GntR family transcriptional regulator, at 1,264,744 to 1,265,664 _RS05990 RS_RS05995: RS_RS05995 - CoA transferase, at 1,265,697 to 1,266,905 _RS05995
Group Condition RS_RS05975 RS_RS05980 RS_RS05985 RS_RS05990 RS_RS05995
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -2.7 -0.0 N.D. -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -1.1 -0.7 N.D. -0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -2.6 +0.2 N.D. +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.8 -0.1 N.D. -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.5 -0.3 N.D. -0.3
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -1.9 -0.1 N.D. +0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -2.1 +0.2 N.D. -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. -2.2 +0.1 N.D. +0.1
survival Treatment=Stationary_phase_water_1week; Collection=outgrowth_in_cpg N.D. -1.3 -0.3 N.D. -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -1.6 +0.0 N.D. -0.2
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.1 -0.2 N.D. -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -1.6 -0.5 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.1 -0.2 N.D. -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.4 -0.1 N.D. -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.2 -0.1 N.D. -0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 -0.9 N.D. -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -1.3 -0.3 N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -1.0 -0.4 N.D. +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -1.6 +0.5 N.D. -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -1.5 +0.3 N.D. +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -1.3 +0.4 N.D. +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.4 -0.6 N.D. +0.3
carbon source L-Aspartic Acid (C) N.D. -0.8 +0.1 N.D. +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.7 +0.3 N.D. +0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.0 -0.3 N.D. -0.1
carbon source L-Glutamine (C) N.D. +0.0 +1.0 N.D. +0.3
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.5 +0.4 N.D. -0.3
carbon source D-Glucose (C) N.D. +0.8 +0.5 N.D. +0.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.1 +0.5 N.D. +0.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.2 +0.5 N.D. +0.0
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