Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS05280 and RS_RS05285 overlap by 4 nucleotidesRS_RS05285 and RS_RS05290 overlap by 4 nucleotidesRS_RS05290 and RS_RS05295 are separated by 114 nucleotidesRS_RS05295 and RS_RS05300 are separated by 122 nucleotides RS_RS05280: RS_RS05280 - pyridoxine 5'-phosphate synthase, at 1,119,095 to 1,119,886 _RS05280 RS_RS05285: RS_RS05285 - holo-ACP synthase, at 1,119,883 to 1,120,326 _RS05285 RS_RS05290: RS_RS05290 - beta-N-acetylhexosaminidase, at 1,120,323 to 1,121,375 _RS05290 RS_RS05295: RS_RS05295 - elongation factor P, at 1,121,490 to 1,122,050 _RS05295 RS_RS05300: RS_RS05300 - elongation factor P maturation arginine rhamnosyltransferase EarP, at 1,122,173 to 1,123,363 _RS05300
Group Condition RS_RS05280 RS_RS05285 RS_RS05290 RS_RS05295 RS_RS05300
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. -6.1 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. -4.3 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. -4.3 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. -4.0 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. -3.2 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. -2.7 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days N.D. N.D. -2.0 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days N.D. N.D. -1.2 N.D. N.D.
carbon source Sucrose (C) N.D. N.D. -0.9 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.8 N.D. N.D.
carbon source Sucrose (C) N.D. N.D. -0.7 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -0.6 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. -0.5 N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. -0.5 N.D. N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. N.D. -0.4 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 N.D. N.D.
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. -0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. -0.4 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.3 N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. +0.4 N.D. N.D.
carbon source succinate (C) N.D. N.D. +0.4 N.D. N.D.
carbon source D-Glucose (C) N.D. N.D. +0.4 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +0.5 N.D. N.D.
carbon source pyruvate (C) N.D. N.D. +0.5 N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. +0.5 N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. +0.5 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.5 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.5 N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. +0.8 N.D. N.D.
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