Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS05030 and RS_RS05035 are separated by 35 nucleotidesRS_RS05035 and RS_RS05040 are separated by 407 nucleotidesRS_RS05040 and RS_RS05045 are separated by 83 nucleotidesRS_RS05045 and RS_RS05050 are separated by 59 nucleotides RS_RS05030: RS_RS05030 - sugar ABC transporter ATP-binding protein, at 1,069,347 to 1,070,918 _RS05030 RS_RS05035: RS_RS05035 - sugar ABC transporter substrate-binding protein, at 1,070,954 to 1,071,913 _RS05035 RS_RS05040: RS_RS05040 - Fe-S cluster assembly transcriptional regulator IscR, at 1,072,321 to 1,072,902 _RS05040 RS_RS05045: RS_RS05045 - IscS subfamily cysteine desulfurase, at 1,072,986 to 1,074,203 _RS05045 RS_RS05050: RS_RS05050 - Fe-S cluster assembly scaffold IscU, at 1,074,263 to 1,074,664 _RS05050
Group Condition RS_RS05030 RS_RS05035 RS_RS05040 RS_RS05045 RS_RS05050
carbon source pyruvate (C) +0.6 -1.8 N.D. N.D. N.D.
carbon source D-Galactose (C) +0.3 -1.5 N.D. N.D. N.D.
carbon source D-Glucose (C) +0.5 -1.6 N.D. N.D. N.D.
carbon source L-Aspartic Acid (C) +0.9 -1.8 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.7 -1.6 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) +0.5 -1.2 N.D. N.D. N.D.
carbon source L-Glutamine (C) +0.6 -1.1 N.D. N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.9 -2.3 N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.9 -1.2 N.D. N.D. N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.4 -1.6 N.D. N.D. N.D.
carbon source succinate (C) +0.9 -1.0 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 -0.9 N.D. N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.2 -1.1 N.D. N.D. N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 -0.7 N.D. N.D. N.D.
carbon source L-Aspartic Acid (C) +1.0 -0.7 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.9 -0.6 N.D. N.D. N.D.
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.2 -0.8 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.2 -0.8 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.3 -0.6 N.D. N.D. N.D.
carbon source succinate (C) +1.2 -0.3 N.D. N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +2.2 -1.0 N.D. N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.5 -0.3 N.D. N.D. N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.1 -0.8 N.D. N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 +1.1 N.D. N.D. N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.2 +0.3 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.5 +1.0 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.5 +1.3 N.D. N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +2.7 -0.2 N.D. N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.3 +0.7 N.D. N.D. N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +3.4 +1.1 N.D. N.D. N.D.
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