Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS05005 and RS_RS05010 are separated by 158 nucleotidesRS_RS05010 and RS_RS05015 are separated by 26 nucleotidesRS_RS05015 and RS_RS05020 are separated by 36 nucleotidesRS_RS05020 and RS_RS05025 are separated by 19 nucleotides RS_RS05005: RS_RS05005 - UvrABC system protein B, at 1,061,898 to 1,063,988 _RS05005 RS_RS05010: RS_RS05010 - recombinase, at 1,064,147 to 1,066,237 _RS05010 RS_RS05015: RS_RS05015 - ribokinase, at 1,066,264 to 1,067,211 _RS05015 RS_RS05020: RS_RS05020 - LacI family transcriptional regulator, at 1,067,248 to 1,068,291 _RS05020 RS_RS05025: RS_RS05025 - ABC transporter permease, at 1,068,311 to 1,069,357 _RS05025
Group Condition RS_RS05005 RS_RS05010 RS_RS05015 RS_RS05020 RS_RS05025
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -2.1 -0.3 -0.2 -1.6 +0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -2.8 -0.2 +0.3 -1.2 +0.7
carbon source pyruvate (C) -0.1 -2.1 +0.0 -1.0 +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.5 -0.0 -1.1 -1.3 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.6 -0.3 -0.6 -1.3 +0.2
carbon source D-Galactose (C) -0.2 -0.5 -0.6 -1.6 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -0.4 -0.7 -0.6 +1.0
carbon source L-Aspartic Acid (C) -0.0 -1.0 -0.8 -0.6 +1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.6 -1.0 -0.7 +1.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.8 -0.3 -0.6 -0.4 +2.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.5 -0.2 +0.2 -0.2 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 +0.1 -0.4 -1.2 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.1 -0.9 -0.8 +1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.2 -0.5 -0.7 +1.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -0.6 -0.3 -0.6 +1.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 +0.3 -0.4 -0.9 +0.7
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 -0.3 -0.1 -0.7 +1.4
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.2 +0.2 -0.1 -1.3 +2.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.5 -0.5 -0.2 +1.2
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 -0.0 -0.3 -1.0 +1.8
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.3 +0.2 -0.5 -0.3 +1.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.2 -0.4 -0.9 +2.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -0.5 -0.1 -1.1 +1.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.2 -0.4 -0.9 +1.5
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.2 -0.9 -0.4 +1.9
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.5 -0.6 +1.1 -0.2 +2.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.1 +0.2 +1.0 +0.9 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 -0.3 +1.4 -0.4 +1.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 +0.0 +1.1 -0.0 +1.7
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.4 -0.4 -0.6 +2.5
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