Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS04875	RS_RS04880	RS_RS04885	RS_RS04890	RS_RS04895
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-3.2	N.D.	-0.5	-0.6	-0.0
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-3.4	N.D.	-0.4	-0.5	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-3.6	N.D.	-0.1	-0.2	+0.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-2.7	N.D.	-0.2	-1.0	+0.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-3.8	N.D.	+0.0	+0.2	+0.0
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-2.9	N.D.	+0.4	-0.2	+0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-2.1	N.D.	-0.2	-0.4	+0.3
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-1.6	N.D.	-0.6	-0.0	+0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-1.2	N.D.	-0.4	-0.4	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-2.1	N.D.	+0.1	-0.1	+0.2
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-1.2	N.D.	+0.2	-0.2	-0.6
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-2.1	N.D.	+0.2	+0.2	-0.0
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-1.8	N.D.	+0.1	+0.1	-0.0
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-1.7	N.D.	-0.0	+0.2	-0.0
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-2.1	N.D.	+0.1	+0.2	+0.2
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.7	N.D.	-0.2	-0.7	+0.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-1.9	N.D.	+0.0	+0.4	+0.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-1.7	N.D.	+0.1	+0.3	+0.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-1.6	N.D.	+0.0	+0.3	+0.2
carbon source	L-Glutamic (C)	-0.7	N.D.	-0.7	+0.6	+0.0
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-1.2	N.D.	+0.3	-0.0	+0.4
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-0.7	N.D.	+0.2	+0.7	+0.4
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+1.9	N.D.	-0.3	-0.6	-0.1
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+1.1	N.D.	+0.0	+0.5	-0.6
in planta	Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.1	N.D.	-0.4	+1.0	+0.7
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+2.3	N.D.	+0.2	+0.0	-0.9
in planta	Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+1.3	N.D.	+0.4	-0.1	+0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	+1.5	N.D.	+0.1	-0.2	+0.4
in planta	Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+2.2	N.D.	-0.7	+0.5	-0.1
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+1.2	N.D.	+0.7	+0.3	+0.3