Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS04710 and RS_RS04715 are separated by 207 nucleotidesRS_RS04715 and RS_RS04720 overlap by 4 nucleotidesRS_RS04720 and RS_RS04725 are separated by 485 nucleotidesRS_RS04725 and RS_RS04730 are separated by 79 nucleotides RS_RS04710: RS_RS04710 - thymidylate synthase, at 994,874 to 995,668 _RS04710 RS_RS04715: RS_RS04715 - serine/threonine dehydratase, at 995,876 to 996,880 _RS04715 RS_RS04720: RS_RS04720 - membrane protein, at 996,877 to 997,569 _RS04720 RS_RS04725: RS_RS04725 - L-histidine N(alpha)-methyltransferase, at 998,055 to 999,101 _RS04725 RS_RS04730: RS_RS04730 - ergothioneine biosynthesis protein EgtB, at 999,181 to 1,000,479 _RS04730
Group Condition RS_RS04710 RS_RS04715 RS_RS04720 RS_RS04725 RS_RS04730
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 N.D. -0.2 -0.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.3 N.D. -0.2 -0.3
carbon source L-Glutamic (C) N.D. -0.2 N.D. -0.2 -0.4
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 N.D. -0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 N.D. -0.1 -0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.1 N.D. +0.1 -0.7
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.2 N.D. +0.1 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 N.D. -0.3 +0.1
carbon source L-Aspartic Acid (C) N.D. -0.2 N.D. -0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 N.D. +0.1 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.0 N.D. +0.1 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.5 N.D. +0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 N.D. +0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 N.D. +0.2 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.2 N.D. +0.1 -0.6
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.2 N.D. +0.2 -0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.2 N.D. +0.3 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.1 N.D. +0.3 -0.3
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.0 N.D. -0.4 +0.4
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.1 N.D. -0.2 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.1 N.D. +0.3 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. +0.2 N.D. +0.4 -0.4
carbon source D-Glucose (C) N.D. +0.1 N.D. +0.5 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. +0.1 N.D. +0.6 -0.3
carbon source L-Alanine (C) N.D. +0.6 N.D. +0.2 -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. +0.1 N.D. +0.4 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.2 N.D. +0.3 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +0.2 N.D. +0.1 +0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.1 N.D. +0.6 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.2 N.D. +0.5 +0.3
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