Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS03720 and RS_RS03725 are separated by 62 nucleotidesRS_RS03725 and RS_RS03730 are separated by 187 nucleotidesRS_RS03730 and RS_RS03735 are separated by 534 nucleotidesRS_RS03735 and RS_RS03740 overlap by 1 nucleotides RS_RS03720: RS_RS03720 - YeeE/YedE family protein, at 785,213 to 786,328 _RS03720 RS_RS03725: RS_RS03725 - tRNA-Lys, at 786,391 to 786,466 _RS03725 RS_RS03730: RS_RS03730 - hypothetical protein, at 786,654 to 787,010 _RS03730 RS_RS03735: RS_RS03735 - chemotaxis protein CheY, at 787,545 to 787,949 _RS03735 RS_RS03740: RS_RS03740 - protein phosphatase CheZ, at 787,949 to 788,611 _RS03740
Group Condition RS_RS03720 RS_RS03725 RS_RS03730 RS_RS03735 RS_RS03740
carbon source L-Aspartic Acid (C) -0.3 N.D. -2.3 N.D. -0.6
carbon source D-Glucose (C) -0.2 N.D. -2.1 N.D. -0.1
carbon source D,L-Malic Acid (C) -0.2 N.D. -1.4 N.D. -0.4
carbon source pyruvate (C) +0.2 N.D. -2.4 N.D. +0.4
carbon source L-Glutamine (C) +0.0 N.D. -1.4 N.D. -0.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 N.D. +0.3 N.D. -1.5
carbon source L-Glutamic (C) -0.1 N.D. -1.5 N.D. +0.0
carbon source D-Galactose (C) -0.1 N.D. -1.5 N.D. +0.1
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 N.D. +0.2 N.D. -1.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 N.D. -0.4 N.D. -0.6
carbon source succinate (C) -0.1 N.D. -0.6 N.D. -0.6
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 N.D. -0.4 N.D. -0.5
carbon source D-Glucose (C) -0.4 N.D. -0.4 N.D. -0.3
carbon source D-Galactose (C) -0.4 N.D. -0.3 N.D. -0.4
carbon source L-Glutamine (C) -0.1 N.D. +0.0 N.D. -1.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 N.D. -0.1 N.D. -0.8
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.2 N.D. -0.5 N.D. -0.7
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.0 N.D. +0.1 N.D. -0.9
carbon source L-Aspartic Acid (C) -0.7 N.D. -0.3 N.D. +0.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 N.D. -1.0 N.D. +0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.6 N.D. -0.2 N.D. -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -0.5 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 N.D. -0.3 N.D. +0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.7 N.D. -0.4 N.D. +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 N.D. +0.1 N.D. +0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. +1.0 N.D. -0.5
carbon source Sucrose (C) -0.2 N.D. +0.7 N.D. +0.7
carbon source pyruvate (C) +0.3 N.D. +0.5 N.D. +0.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 N.D. +0.2 N.D. +0.7
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 N.D. +0.1 N.D. +0.7
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