Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS03710	RS_RS03715	RS_RS03720	RS_RS03725	RS_RS03730
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.7	-4.6	-0.1	N.D.	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.1	-5.4	+0.1	N.D.	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.4	-4.8	-0.1	N.D.	+0.2
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.2	-4.4	+0.1	N.D.	+0.1
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.7	-3.2	-0.2	N.D.	-0.3
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.2	-3.8	-0.3	N.D.	+0.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.0	-4.1	+0.1	N.D.	+0.1
carbon source	D-Glucose (C)	-0.3	-1.2	-0.2	N.D.	-2.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-0.3	-3.2	+0.1	N.D.	+0.1
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.5	-2.4	-0.1	N.D.	-0.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.1	-1.7	-0.2	N.D.	-0.2
carbon source	pyruvate (C)	-0.5	-0.4	+0.2	N.D.	-2.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.1	-2.8	-0.2	N.D.	+0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.5	-2.1	-0.2	N.D.	-0.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-0.2	-2.6	-0.1	N.D.	-0.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.3	-1.8	-0.1	N.D.	+0.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-1.0	-2.2	-0.0	N.D.	+0.2
carbon source	L-Aspartic Acid (C)	-0.5	+0.2	-0.3	N.D.	-2.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-0.6	-2.6	+0.1	N.D.	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.4	-2.6	-0.0	N.D.	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.3	-2.3	-0.2	N.D.	-0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	-1.6	-0.8	-0.2	N.D.	-0.3
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-0.5	-2.4	+0.1	N.D.	+0.2
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-1.8	-0.9	-0.0	N.D.	+0.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-0.8	-2.3	-0.1	N.D.	+0.6
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-0.1	-2.5	+0.1	N.D.	+0.2
in planta	Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	-1.1	-1.5	+0.2	N.D.	+0.3
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-1.1	-1.1	+0.6	N.D.	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	-1.7	-0.6	+0.1	N.D.	+0.4
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-0.9	-1.1	+0.7	N.D.	-0.4