Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS03470 and RS_RS03475 are separated by 80 nucleotidesRS_RS03475 and RS_RS03480 are separated by 41 nucleotidesRS_RS03480 and RS_RS03485 overlap by 1 nucleotidesRS_RS03485 and RS_RS03490 are separated by 126 nucleotides RS_RS03470: RS_RS03470 - chain-length determining protein, at 738,205 to 739,107 _RS03470 RS_RS03475: RS_RS03475 - phosphomannomutase/phosphoglucomutase, at 739,188 to 740,573 _RS03475 RS_RS03480: RS_RS03480 - lipopolysaccharide heptosyltransferase I, at 740,615 to 741,613 _RS03480 RS_RS03485: RS_RS03485 - 3-deoxy-D-manno-octulosonic acid transferase, at 741,613 to 742,929 _RS03485 RS_RS03490: RS_RS03490 - META domain-containing protein, at 743,056 to 743,796 _RS03490
Group Condition RS_RS03470 RS_RS03475 RS_RS03480 RS_RS03485 RS_RS03490
carbon source L-Glutamine (C) -0.8 N.D. N.D. N.D. -1.3
carbon source D-Galactose (C) -0.3 N.D. N.D. N.D. -1.6
carbon source L-Aspartic Acid (C) -0.8 N.D. N.D. N.D. -0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 N.D. N.D. N.D. -1.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.8 N.D. N.D. N.D. -0.5
carbon source pyruvate (C) -0.0 N.D. N.D. N.D. -1.0
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.5 N.D. N.D. N.D. -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.3 N.D. N.D. N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.2 N.D. N.D. N.D. +0.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. N.D. N.D. -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.8 N.D. N.D. N.D. +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 N.D. N.D. N.D. -0.7
carbon source D,L-Malic Acid (C) -0.9 N.D. N.D. N.D. +0.5
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 N.D. N.D. N.D. -0.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.6 N.D. N.D. N.D. -0.8
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days -0.6 N.D. N.D. N.D. +0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 N.D. N.D. N.D. -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 N.D. N.D. N.D. -0.5
carbon source L-Aspartic Acid (C) -0.5 N.D. N.D. N.D. +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.7 N.D. N.D. N.D. -0.4
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 N.D. N.D. N.D. -0.5
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.1 N.D. N.D. N.D. -0.5
cpg CPG +0.9 N.D. N.D. N.D. -0.0
carbon source Sucrose (C) +0.5 N.D. N.D. N.D. +0.4
m63_quarter_strength M63_quarter_strength +0.8 N.D. N.D. N.D. +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 N.D. N.D. N.D. +0.5
carbon source succinate (C) +0.4 N.D. N.D. N.D. +0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.6 N.D. N.D. N.D. -0.5
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +2.0 N.D. N.D. N.D. -0.3
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.5 N.D. N.D. N.D. +2.0
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