Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS03155 and RS_RS03160 are separated by 64 nucleotidesRS_RS03160 and RS_RS03165 are separated by 212 nucleotidesRS_RS03165 and RS_RS03170 are separated by 80 nucleotidesRS_RS03170 and RS_RS03175 are separated by 56 nucleotides RS_RS03155: RS_RS03155 - lipoprotein, at 676,243 to 677,253 _RS03155 RS_RS03160: RS_RS03160 - cytochrome c, at 677,318 to 677,596 _RS03160 RS_RS03165: RS_RS03165 - hypothetical protein, at 677,809 to 678,165 _RS03165 RS_RS03170: RS_RS03170 - hypothetical protein, at 678,246 to 678,974 _RS03170 RS_RS03175: RS_RS03175 - NAD(P)-dependent alcohol dehydrogenase, at 679,031 to 680,089 _RS03175
Group Condition RS_RS03155 RS_RS03160 RS_RS03165 RS_RS03170 RS_RS03175
carbon source L-Aspartic Acid (C) -0.1 -1.9 -1.1 +0.2 -1.1
carbon source pyruvate (C) -0.7 -1.9 -1.0 +0.1 -0.1
carbon source D-Galactose (C) +0.4 -1.4 -1.8 -0.1 -0.7
carbon source D-Glucose (C) -0.4 -1.8 -1.5 +0.1 +0.2
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.9 -2.0 +0.1 +0.3 -0.4
carbon source pyruvate (C) +0.0 -2.1 -0.7 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 -2.5 -0.0 +0.1 -0.1
carbon source D,L-Malic Acid (C) +0.3 -1.3 -1.0 +0.0 -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.6 -1.2 -0.1 +0.0 -0.5
carbon source L-Aspartic Acid (C) -0.1 -1.4 -0.7 -0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -2.0 -0.0 +0.1 -0.0
carbon source L-Alanine (C) +0.3 -1.9 -0.4 +0.3 -0.1
carbon source L-Glutamine (C) +0.4 -1.6 -0.4 -0.1 -0.1
carbon source L-Aspartic Acid (C) +0.2 -2.0 -0.2 +0.2 +0.2
carbon source L-Glutamine (C) +0.2 -1.3 -0.4 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix +0.4 -2.4 -0.1 +0.3 +0.1
carbon source Sucrose (C) -0.1 -1.3 -0.3 +0.0 +0.4
carbon source D-Glucose (C) +0.3 -1.9 -0.2 +0.4 +0.3
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.9 -1.0 -0.3 -0.5 +0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -1.0 +0.2 +0.3 +0.5
carbon source succinate (C) +0.4 -1.3 -0.2 -0.0 +0.3
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.2 -2.0 +0.5 -0.0 -0.2
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 -1.6 -0.3 -0.3 +0.7
carbon source L-Alanine (C) +0.4 -1.3 +0.3 +0.1 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.3 -1.3 +0.2 +0.0 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 +1.2 -0.3 -0.3 -0.1
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 +0.6 -0.8 +0.4 +0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.1 -0.3 -0.0 -0.2 +1.4
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.8 +1.7 -0.0 +0.0 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 +2.0 -0.1 +0.1 -0.1
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