Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS02745 and RS_RS02750 overlap by 4 nucleotidesRS_RS02750 and RS_RS02755 overlap by 8 nucleotidesRS_RS02755 and RS_RS02760 are separated by 276 nucleotidesRS_RS02760 and RS_RS02765 are separated by 94 nucleotides RS_RS02745: RS_RS02745 - DUF4212 domain-containing protein, at 593,354 to 593,671 _RS02745 RS_RS02750: RS_RS02750 - sensor histidine kinase, at 593,668 to 595,209 _RS02750 RS_RS02755: RS_RS02755 - DNA-binding response regulator, at 595,202 to 595,900 _RS02755 RS_RS02760: RS_RS02760 - DNA recombination/repair protein RecA, at 596,177 to 597,235 _RS02760 RS_RS02765: RS_RS02765 - regulatory protein RecX, at 597,330 to 597,809 _RS02765
Group Condition RS_RS02745 RS_RS02750 RS_RS02755 RS_RS02760 RS_RS02765
carbon source L-Alanine (C) +0.1 -0.1 -0.3 N.D. -3.4
carbon source Sucrose (C) -0.1 -0.2 -0.5 N.D. -2.8
carbon source L-Aspartic Acid (C) +0.1 +0.0 -0.1 N.D. -3.5
carbon source Sucrose (C) -0.4 -0.2 -0.2 N.D. -2.3
carbon source L-Glutamic (C) -0.2 -0.0 -0.5 N.D. -1.6
carbon source D-Glucose (C) -0.2 -0.1 +0.1 N.D. -1.6
carbon source pyruvate (C) -0.2 -0.0 -0.3 N.D. -1.1
carbon source D-Galactose (C) -0.0 -0.4 +0.1 N.D. -1.4
carbon source L-Glutamine (C) +0.3 +0.2 -0.4 N.D. -1.7
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -0.4 N.D. -1.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.7 -0.2 +0.1 N.D. -2.2
carbon source D-Glucose (C) +0.2 +0.0 -0.4 N.D. -1.0
carbon source L-Aspartic Acid (C) -0.3 +0.1 +0.2 N.D. -1.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.2 -0.2 +0.4 N.D. -0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 -0.4 -0.1 N.D. -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.5 +0.4 +0.5 N.D. -0.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.4 -0.1 N.D. +0.2
cpg CPG +0.4 +0.4 -0.1 N.D. -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 -0.4 -0.0 N.D. +0.5
carbon source D-Galactose (C) -0.6 +0.6 +0.4 N.D. +0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.3 -0.2 N.D. -0.1
carbon source L-Glutamine (C) -0.0 -0.3 +0.1 N.D. +0.8
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.4 +0.3 +0.2 N.D. -0.3
carbon source pyruvate (C) -0.6 +0.1 +0.6 N.D. +0.7
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.7 -0.3 N.D. +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 -0.2 +0.3 N.D. +0.7
carbon source D,L-Malic Acid (C) -0.4 -0.1 +0.6 N.D. +1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +0.2 N.D. +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.4 +0.5 +0.3 N.D. +0.2
carbon source D-Glucose (C) -0.3 -0.2 +1.3 N.D. +0.8
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