Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS02680 and RS_RS02685 are separated by 18 nucleotidesRS_RS02685 and RS_RS02690 are separated by 87 nucleotidesRS_RS02690 and RS_RS25320 are separated by 258 nucleotidesRS_RS25320 and RS_RS02695 are separated by 634 nucleotides RS_RS02680: RS_RS02680 - 3-oxoacyl-ACP reductase, at 576,660 to 578,072 _RS02680 RS_RS02685: RS_RS02685 - acyl-CoA dehydrogenase, at 578,091 to 580,598 _RS02685 RS_RS02690: RS_RS02690 - TetR/AcrR family transcriptional regulator, at 580,686 to 581,708 _RS02690 RS_RS25320: RS_RS25320 - hypothetical protein, at 581,967 to 582,201 _RS25320 RS_RS02695: RS_RS02695 - RNA helicase, at 582,836 to 584,458 _RS02695
Group Condition RS_RS02680 RS_RS02685 RS_RS02690 RS_RS25320 RS_RS02695
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.2 +0.0 +0.1 N.D. -3.2
carbon source Sucrose (C) -0.4 -0.1 -0.8 N.D. -1.0
cpg CPG +0.0 -0.1 -0.1 N.D. -2.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 +0.1 +0.0 N.D. -1.9
carbon source pyruvate (C) +0.0 +0.2 -0.7 N.D. -1.3
carbon source L-Glutamine (C) +0.2 -0.0 -0.3 N.D. -1.6
carbon source L-Alanine (C) -0.1 -0.0 -0.5 N.D. -0.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 +0.1 +0.1 N.D. -1.6
carbon source D-Glucose (C) +0.1 +0.1 -0.5 N.D. -1.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 +0.2 -0.1 N.D. -1.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 +0.1 -0.1 N.D. -1.2
carbon source pyruvate (C) +0.3 -0.2 -0.5 N.D. -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.0 -0.1 +0.2 N.D. -1.2
carbon source L-Aspartic Acid (C) +0.2 +0.1 -0.0 N.D. -1.3
carbon source D-Galactose (C) +0.2 +0.1 -0.8 N.D. -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.0 +0.0 +0.1 N.D. -1.1
carbon source D-Glucose (C) -0.2 -0.0 +0.4 N.D. -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.2 +0.4 N.D. -1.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.1 +0.9 N.D. -0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.1 -0.1 +0.3 N.D. +0.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.0 -0.1 N.D. +1.5
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 -0.0 -0.1 N.D. +1.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 +0.1 +0.5 N.D. +0.9
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.3 +0.2 +0.2 N.D. +1.3
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.2 +0.7 N.D. +0.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 +0.1 +0.6 N.D. +1.1
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.1 +0.2 +0.0 N.D. +1.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.1 -0.1 N.D. +1.8
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 +0.4 -0.1 N.D. +1.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 +0.5 N.D. +1.5
remove
RS_RS02680
plot
remove
RS_RS02685
plot
remove
RS_RS02690
remove
RS_RS25320
plot
remove
RS_RS02695
plot