Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS01565 and RS_RS01570 are separated by 44 nucleotidesRS_RS01570 and RS_RS01575 are separated by 237 nucleotidesRS_RS01575 and RS_RS01580 are separated by 151 nucleotidesRS_RS01580 and RS_RS01585 are separated by 217 nucleotides RS_RS01565: RS_RS01565 - hypothetical protein, at 349,444 to 349,674 _RS01565 RS_RS01570: RS_RS01570 - phospholipase C, phosphocholine-specific, at 349,719 to 351,821 _RS01570 RS_RS01575: RS_RS01575 - hypothetical protein, at 352,059 to 352,373 _RS01575 RS_RS01580: RS_RS01580 - type III secretion system YopJ family effector RipAE, at 352,525 to 354,456 _RS01580 RS_RS01585: RS_RS01585 - lipoyl synthase, at 354,674 to 355,675 _RS01585
Group Condition RS_RS01565 RS_RS01570 RS_RS01575 RS_RS01580 RS_RS01585
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 -0.2 -0.4 N.D.
carbon source L-Aspartic Acid (C) N.D. -0.2 -0.3 -0.5 N.D.
carbon source L-Glutamine (C) N.D. -0.1 -0.5 -0.3 N.D.
carbon source L-Glutamic (C) N.D. -0.2 -0.4 -0.3 N.D.
carbon source D-Galactose (C) N.D. -0.1 -0.1 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.2 -0.2 -0.1 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.0 -0.2 -0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.1 +0.2 -0.5 N.D.
carbon source D-Glucose (C) N.D. -0.0 -0.5 +0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.1 +0.2 -0.6 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. +0.0 +0.1 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 -0.3 +0.1 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. +0.2 -0.5 -0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.1 +0.2 -0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.1 -0.3 +0.2 N.D.
carbon source L-Glutamic (C) N.D. -0.1 +0.3 -0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.1 +0.2 -0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. +0.1 +0.3 -0.5 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -0.2 +0.2 +0.3 N.D.
carbon source Sucrose (C) N.D. +0.3 +0.2 -0.2 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.0 -0.1 +0.6 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.3 +0.4 -0.3 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.0 +0.6 -0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. +0.0 +0.2 +0.2 N.D.
carbon source D-Glucose (C) N.D. +0.1 +0.2 +0.3 N.D.
carbon source succinate (C) N.D. +0.1 +0.3 +0.2 N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.1 +0.5 +0.1 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.6 +0.1 +0.3 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.2 +0.7 +0.2 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.6 +0.5 +0.1 N.D.
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