Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS01380 and RS_RS01385 are separated by 19 nucleotidesRS_RS01385 and RS_RS01390 are separated by 79 nucleotidesRS_RS01390 and RS_RS01395 overlap by 1 nucleotidesRS_RS01395 and RS_RS01400 are separated by 116 nucleotides RS_RS01380: RS_RS01380 - Zn-dependent hydrolase, at 314,264 to 315,343 _RS01380 RS_RS01385: RS_RS01385 - antibiotic biosynthesis monooxygenase, at 315,363 to 315,746 _RS01385 RS_RS01390: RS_RS01390 - hypothetical protein, at 315,826 to 316,671 _RS01390 RS_RS01395: RS_RS01395 - short-chain dehydrogenase, at 316,671 to 317,471 _RS01395 RS_RS01400: RS_RS01400 - thiol:disulfide interchange protein DsbA/DsbL, at 317,588 to 318,244 _RS01400
Group Condition RS_RS01380 RS_RS01385 RS_RS01390 RS_RS01395 RS_RS01400
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 +0.0 -0.0 -0.5 -4.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.1 -0.3 +0.3 -0.6 -3.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 -0.6 +0.4 -0.5 -3.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.2 -0.7 +0.2 -0.1 -3.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.5 +0.1 +0.1 -4.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.1 -0.2 +0.0 -4.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 -0.0 -0.0 -0.1 -3.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.0 -0.1 -0.1 -3.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 -0.1 +0.2 -0.1 -3.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.0 +0.1 +0.2 +0.0 -3.8
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.3 -0.1 -0.4 -3.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.1 -0.0 -0.2 -3.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.2 -0.0 -0.2 -3.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.2 -0.0 +0.1 +0.0 -3.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 -0.2 +0.1 +0.0 -3.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.0 +0.2 -0.3 -2.7
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.4 +0.2 -0.3 -3.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 +0.1 -0.2 -3.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.0 +0.2 +0.1 -0.0 -3.4
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.2 +0.2 +0.2 -0.3 -2.9
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.6 +0.3 -0.0 -3.6
carbon source L-Glutamic (C) +0.0 -0.4 +0.2 -0.3 -2.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.1 +0.2 +0.1 -0.1 -2.8
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.3 -0.1 +0.1 -3.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.5 +0.6 -0.0 -0.2 -2.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.3 +0.1 +0.2 -3.0
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.4 -0.2 -0.1 +0.5 -2.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 +0.3 -0.0 -0.2 -2.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.0 +0.1 +0.2 +0.6 -2.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.5 +0.0 +0.3 -2.7
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