Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS01120 and RS_RS25270 are separated by 682 nucleotidesRS_RS25270 and RS_RS01125 are separated by 326 nucleotidesRS_RS01125 and RS_RS25275 are separated by 29 nucleotidesRS_RS25275 and RS_RS01130 overlap by 4 nucleotides RS_RS01120: RS_RS01120 - RNA 3'-terminal phosphate cyclase, at 248,347 to 249,390 _RS01120 RS_RS25270: RS_RS25270 - hypothetical protein, at 250,073 to 250,351 _RS25270 RS_RS01125: RS_RS01125 - PLP-dependent aminotransferase family protein, at 250,678 to 251,886 _RS01125 RS_RS25275: RS_RS25275 - hypothetical protein, at 251,916 to 252,101 _RS25275 RS_RS01130: RS_RS01130 - membrane protein, at 252,098 to 253,294 _RS01130
Group Condition RS_RS01120 RS_RS25270 RS_RS01125 RS_RS25275 RS_RS01130
carbon source L-Aspartic Acid (C) -2.2 -0.6 -0.3 N.D. +0.5
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.3 -0.1 -0.3 N.D. -0.3
carbon source L-Glutamine (C) -0.8 -0.3 -0.4 N.D. +0.1
carbon source D,L-Malic Acid (C) -1.1 -0.2 -0.5 N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days -0.9 -0.2 -0.1 N.D. -0.1
carbon source L-Aspartic Acid (C) -1.3 +0.4 -0.6 N.D. +0.3
carbon source L-Glutamic (C) -0.3 -0.6 -0.2 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -1.1 -0.0 -0.0 N.D. +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.7 -0.3 +0.1 N.D. -0.1
carbon source D-Galactose (C) -0.6 +0.0 -0.4 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -1.0 +0.1 -0.1 N.D. +0.0
carbon source pyruvate (C) -0.9 +0.3 -0.4 N.D. -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 -0.6 +0.1 N.D. -0.2
carbon source D-Glucose (C) -0.6 +0.3 -0.3 N.D. -0.2
carbon source D-Galactose (C) +0.4 -0.4 -0.5 N.D. -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.9 +0.0 +0.3 N.D. +0.3
carbon source succinate (C) -0.4 +0.7 -0.4 N.D. -0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.7 +0.2 +0.3 N.D. +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.8 -0.2 -0.5 N.D. +0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.4 +0.3 +0.3 N.D. +0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.1 -0.3 N.D. -0.1
carbon source L-Glutamic (C) +0.2 +0.4 -0.4 N.D. +0.3
carbon source L-Alanine (C) +0.1 +0.5 -0.3 N.D. +0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.0 +0.4 N.D. +0.6
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 +0.3 -0.1 N.D. +0.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 -0.1 +0.0 N.D. +0.0
smsa no antibiotic control SMSA no antibiotic control +0.8 -0.1 +0.2 N.D. +0.1
carbon source D-Glucose (C) +1.1 -0.0 +0.0 N.D. -0.0
carbon source D-Glucose (C) +1.1 +0.4 -0.1 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.4 +0.2 -0.0 N.D. -0.0
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