Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS00645 and RS_RS00650 are separated by 20 nucleotidesRS_RS00650 and RS_RS00655 are separated by 309 nucleotidesRS_RS00655 and RS_RS00660 are separated by 72 nucleotidesRS_RS00660 and RS_RS00665 are separated by 240 nucleotides RS_RS00645: RS_RS00645 - phosphatase PAP2 family protein, at 152,819 to 154,792 _RS00645 RS_RS00650: RS_RS00650 - AraC family transcriptional regulator, at 154,813 to 155,694 _RS00650 RS_RS00655: RS_RS00655 - GYD domain-containing protein, at 156,004 to 156,297 _RS00655 RS_RS00660: RS_RS00660 - S-adenosylmethionine synthase, at 156,370 to 157,560 _RS00660 RS_RS00665: RS_RS00665 - lauroyl acyltransferase, at 157,801 to 158,649 _RS00665
Group Condition RS_RS00645 RS_RS00650 RS_RS00655 RS_RS00660 RS_RS00665
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 -0.1 +0.2 N.D. -6.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.3 -0.2 -0.9 N.D. -4.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 +0.1 +0.6 N.D. -5.8
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.2 -0.2 -1.9 N.D. -3.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 +0.2 +0.3 N.D. -5.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.1 -0.0 -1.2 N.D. -4.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.2 +0.1 N.D. -5.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 +0.1 -0.5 N.D. -4.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.0 -0.0 +0.2 N.D. -5.0
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.2 -0.1 N.D. -4.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 +0.1 +0.2 N.D. -4.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.0 -1.3 N.D. -3.1
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 +0.3 -0.6 N.D. -4.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.0 -0.5 N.D. -3.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 +0.1 -0.4 N.D. -3.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 -0.0 +0.1 N.D. -3.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 -0.1 -0.1 N.D. -3.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.0 +0.0 -0.5 N.D. -3.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.1 -0.6 N.D. -3.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.4 -0.2 N.D. -3.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.1 +0.8 N.D. -4.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.0 +0.1 +0.0 N.D. -3.4
stress SMSA with Ralstonia_antibiotic_mix -0.0 +0.1 +0.3 N.D. -3.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.0 +0.1 +0.4 N.D. -3.6
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.3 +1.0 N.D. -4.0
stress SMSA with Ralstonia_antibiotic_mix -0.1 +0.0 +0.4 N.D. -3.4
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 +0.3 +0.1 N.D. -3.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.0 +0.1 +0.7 N.D. -3.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 +0.1 +0.9 N.D. -3.6
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 -0.1 +1.4 N.D. -3.8
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