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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum GMI1000
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RS_RS00645 and RS_RS00650 are separated by 20 nucleotides
RS_RS00650 and RS_RS00655 are separated by 309 nucleotides
RS_RS00655 and RS_RS00660 are separated by 72 nucleotides
RS_RS00660 and RS_RS00665 are separated by 240 nucleotides
RS_RS00645: RS_RS00645 - phosphatase PAP2 family protein, at 152,819 to 154,792
_RS00645
RS_RS00650: RS_RS00650 - AraC family transcriptional regulator, at 154,813 to 155,694
_RS00650
RS_RS00655: RS_RS00655 - GYD domain-containing protein, at 156,004 to 156,297
_RS00655
RS_RS00660: RS_RS00660 - S-adenosylmethionine synthase, at 156,370 to 157,560
_RS00660
RS_RS00665: RS_RS00665 - lauroyl acyltransferase, at 157,801 to 158,649
_RS00665
Group
Condition
RS
_RS00645
RS
_RS00650
RS
_RS00655
RS
_RS00660
RS
_RS00665
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+0.2
-0.1
+0.2
N.D.
-6.0
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted
+0.3
-0.2
-0.9
N.D.
-4.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.1
+0.1
+0.6
N.D.
-5.8
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems
+0.2
-0.2
-1.9
N.D.
-3.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.1
+0.2
+0.3
N.D.
-5.6
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted
+0.1
-0.0
-1.2
N.D.
-4.0
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.2
+0.2
+0.1
N.D.
-5.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.1
+0.1
-0.5
N.D.
-4.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.0
-0.0
+0.2
N.D.
-5.0
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
-0.2
-0.1
N.D.
-4.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.1
+0.1
+0.2
N.D.
-4.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+0.0
-1.3
N.D.
-3.1
in planta
Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.6
+0.3
-0.6
N.D.
-4.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.1
+0.0
-0.5
N.D.
-3.4
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.1
+0.1
-0.4
N.D.
-3.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.2
-0.0
+0.1
N.D.
-3.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.2
-0.1
-0.1
N.D.
-3.5
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems
+0.0
+0.0
-0.5
N.D.
-3.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.1
+0.1
-0.6
N.D.
-3.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
-0.4
-0.2
N.D.
-3.4
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
+0.1
+0.8
N.D.
-4.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.0
+0.1
+0.0
N.D.
-3.4
stress
SMSA with Ralstonia_antibiotic_mix
-0.0
+0.1
+0.3
N.D.
-3.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.0
+0.1
+0.4
N.D.
-3.6
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
-0.3
+1.0
N.D.
-4.0
stress
SMSA with Ralstonia_antibiotic_mix
-0.1
+0.0
+0.4
N.D.
-3.4
in planta
Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.1
+0.3
+0.1
N.D.
-3.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.0
+0.1
+0.7
N.D.
-3.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.2
+0.1
+0.9
N.D.
-3.6
in planta
Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.3
-0.1
+1.4
N.D.
-3.8
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