Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS00140 and RS_RS00145 are separated by 4 nucleotidesRS_RS00145 and RS_RS00150 are separated by 150 nucleotidesRS_RS00150 and RS_RS00155 are separated by 194 nucleotidesRS_RS00155 and RS_RS00160 are separated by 38 nucleotides RS_RS00140: RS_RS00140 - NAD-dependent succinate-semialdehyde dehydrogenase, at 32,580 to 34,073 _RS00140 RS_RS00145: RS_RS00145 - 4-aminobutyrate--2-oxoglutarate transaminase, at 34,078 to 35,358 _RS00145 RS_RS00150: RS_RS00150 - PLP-dependent aminotransferase family protein, at 35,509 to 37,005 _RS00150 RS_RS00155: RS_RS00155 - nucleoid occlusion factor SlmA, at 37,200 to 37,856 _RS00155 RS_RS00160: RS_RS00160 - pyrimidine 5'-nucleotidase, at 37,895 to 38,758 _RS00160
Group Condition RS_RS00140 RS_RS00145 RS_RS00150 RS_RS00155 RS_RS00160
carbon source L-Glutamine (C) -1.0 -0.1 -0.1 -0.4 -1.9
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -2.3 -0.2 -0.0 -0.4 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.5 -1.0 +0.0 +0.4 -1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.5 -0.9 +0.0 +0.4 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 +0.0 +0.1 -0.1 -1.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.3 -0.8 +0.1 +0.2 -0.9
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 -0.7 +0.4 +0.2 -1.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.0 -1.0 +0.1 +0.4 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.8 -0.4 +0.0 +0.1 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.0 -0.9 +0.0 +0.2 -0.7
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.7 -0.1 +0.3 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.8 -0.3 +0.1 +0.3 -0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 -0.7 +0.0 +0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.0 -0.7 +0.1 +0.5 +0.2
smsa no antibiotic control SMSA no antibiotic control -2.0 +0.0 +0.0 +0.2 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.9 -1.0 +0.2 +0.4 +0.5
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.4 -0.8 -0.2 +0.1 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.1 -0.1 +0.0 +0.6 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 -0.4 +0.0 +0.5 -0.1
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 -0.5 +0.1 +0.5 -0.3
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -2.0 -0.3 +0.1 +0.5 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 -0.8 +0.2 +0.7 +0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.4 +0.1 +0.8 -1.3
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.0 -0.9 +0.2 +0.6 -0.0
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 -0.7 -0.1 -0.4 +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.4 -0.5 +0.0 +1.2 -0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.7 -0.7 +0.2 +0.5 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.1 -0.4 +0.0 +1.1 +0.3
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 -0.5 +0.1 +0.9 +0.3
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.7 +0.3 +0.6 +1.4
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RS_RS00140
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RS_RS00145
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RS_RS00155
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