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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS37445 and RR42_RS37450 are separated by 252 nucleotides
RR42_RS37450 and RR42_RS37455 are separated by 231 nucleotides
RR42_RS37455 and RR42_RS37460 are separated by 542 nucleotides
RR42_RS37460 and RR42_RS37465 are separated by 463 nucleotides
RR42_RS37445: RR42_RS37445 - hypothetical protein, at 3,879,490 to 3,880,545
_RS37445
RR42_RS37450: RR42_RS37450 - mechanosensitive ion channel protein MscS, at 3,880,798 to 3,881,682
_RS37450
RR42_RS37455: RR42_RS37455 - hypothetical protein, at 3,881,914 to 3,882,111
_RS37455
RR42_RS37460: RR42_RS37460 - MFS transporter, at 3,882,654 to 3,883,907
_RS37460
RR42_RS37465: RR42_RS37465 - LysR family transcriptional regulator, at 3,884,371 to 3,885,282
_RS37465
Group
Condition
RR42
_RS37445
RR42
_RS37450
RR42
_RS37455
RR42
_RS37460
RR42
_RS37465
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.0
-1.5
-2.0
-0.3
-0.3
lb
LB
+0.0
-0.4
-1.6
-0.1
-0.6
carbon source
succinate (C)
-0.1
-0.5
-0.8
-0.2
-0.5
carbon source
Octanoic (C)
-0.2
+0.0
-1.2
-0.4
-0.2
carbon source
Dodecandioic (C)
-0.2
-0.3
-1.0
-0.1
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.4
-0.0
-1.3
-0.2
+0.2
stress
R2A with Cisplatin 0.001 mg/ml
-0.3
-0.1
-1.2
-0.0
-0.1
carbon source
Heptanoic (C)
-0.1
-0.7
-0.2
-0.4
-0.3
nitrogen source
nitrate (N)
-0.1
-0.1
-1.2
-0.2
-0.1
carbon source
Hexanoic (C)
-0.2
-0.6
-0.3
-0.3
-0.2
stress
R2A with Zinc 0.1 mM
-0.3
-0.0
-1.0
+0.0
-0.3
carbon source
Trisodium citrate (C)
-0.2
+0.1
-1.0
-0.1
-0.2
carbon source
Hexanoic (C)
-0.1
-0.7
+0.1
-0.4
-0.4
stress
R2A with Chloride 300 mM
-0.4
-0.2
-0.5
-0.3
-0.1
carbon source
L-Lactate (C)
-0.3
+0.1
-0.7
-0.3
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.2
-1.2
+0.1
+0.0
carbon source
Valeric (C)
+0.0
-0.0
-1.3
-0.0
-0.0
carbon source
L-Histidine (C)
+0.0
-0.0
-0.9
-0.3
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.2
-0.1
-1.0
+0.5
-0.5
nitrogen source
L-Glutamine (N)
-0.2
+0.0
-0.8
-0.4
+0.2
stress
R2A with copper (II) chloride 0.25 mM
-0.2
-0.2
-0.9
+0.2
-0.2
nitrogen source
casaminos (N)
-0.3
-0.0
-0.5
-0.4
+0.2
stress
R2A with Cobalt chloride 0.5 mM
-0.4
-0.1
-0.9
+0.5
+0.1
carbon source
Disodium Glutarate (C)
-0.0
-0.4
+0.6
-0.4
-0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
-0.4
+0.5
+0.1
-0.4
stress
R2A with nitrate 150 mM
-0.3
-0.5
+0.8
-0.3
+0.3
stress
R2A with D-Cycloserine 0.01 mg/ml
-0.2
+0.1
+1.0
-0.3
-0.1
nitrogen source
L-Phenylalanine (N)
-0.0
+0.0
+1.0
-0.4
-0.1
stress
R2A with Lomefloxacin 0.00075 mM
-0.1
+0.3
+1.0
-0.1
+0.1
stress
R2A with Lomefloxacin 0.001 mM
+0.1
-0.4
+0.8
+1.0
+0.2
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RR42_RS37455
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