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Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS37220 and RR42_RS37225 are separated by 617 nucleotides
RR42_RS37225 and RR42_RS37230 are separated by 316 nucleotides
RR42_RS37230 and RR42_RS37235 are separated by 95 nucleotides
RR42_RS37235 and RR42_RS37240 are separated by 789 nucleotides
RR42_RS37220: RR42_RS37220 - hypothetical protein, at 3,815,419 to 3,816,504
_RS37220
RR42_RS37225: RR42_RS37225 - hypothetical protein, at 3,817,122 to 3,817,388
_RS37225
RR42_RS37230: RR42_RS37230 - hypothetical protein, at 3,817,705 to 3,817,935
_RS37230
RR42_RS37235: RR42_RS37235 - hypothetical protein, at 3,818,031 to 3,818,282
_RS37235
RR42_RS37240: RR42_RS37240 - hypothetical protein, at 3,819,072 to 3,819,482
_RS37240
Group
Condition
RR42
_RS37220
RR42
_RS37225
RR42
_RS37230
RR42
_RS37235
RR42
_RS37240
lb
LB
+0.1
-0.2
-0.6
-0.2
-2.9
stress
R2A with Cobalt chloride 0.5 mM
-0.1
-0.4
-0.6
-0.2
-1.3
stress
R2A with copper (II) chloride 0.25 mM
-0.1
-0.4
-0.1
-0.2
-1.8
stress
R2A with Lomefloxacin 0.001 mM
-0.0
+0.5
+0.1
-0.1
-2.9
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.1
-0.6
+0.6
-0.1
-2.0
carbon source
4-Hydroxybenzoic Acid (C)
-0.3
-0.1
+0.2
+0.1
-2.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
+0.1
-0.2
-0.1
-1.7
carbon source
a-Ketoglutaric (C)
-0.1
-0.2
-0.2
-0.4
-1.0
carbon source
D-Lactate (C)
-0.2
-0.3
-0.1
-0.2
-1.1
carbon source
Azelaic (C)
-0.1
-0.1
+0.4
+0.1
-2.2
carbon source
L-Glutamine (C)
-0.1
-0.4
-0.3
+0.1
-1.1
carbon source
succinate (C)
-0.2
-0.2
+0.0
-0.1
-1.4
carbon source
L-Lactate (C)
+0.0
-0.3
-0.2
-0.1
-1.2
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.0
+0.1
+0.2
-0.0
-1.9
nitrogen source
L-Serine (N)
-0.1
-0.0
-0.1
-0.1
-1.3
carbon source
butyrate (C)
-0.0
-0.1
-0.1
-0.2
-1.2
carbon source
L-Alanine (C)
-0.3
+0.0
-0.2
-0.3
-0.9
carbon source
D,L-Lactate (C)
-0.0
-0.2
-0.1
+0.0
-1.3
carbon source
Suberic (C)
-0.0
+0.3
-0.5
+0.3
-1.6
carbon source
L-Malic (C)
-0.1
-0.2
+0.1
-0.2
-1.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.1
-0.5
-0.3
+0.3
-0.8
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.1
+0.0
+0.1
-0.2
-1.3
carbon source
D,L-Lactate (C)
+0.0
+0.1
+0.0
+0.0
-1.4
stress
R2A with nitrate 150 mM
-0.1
-0.1
-0.2
+0.2
-1.1
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.3
+0.3
+0.3
+0.3
-1.7
carbon source
Valeric (C)
-0.0
-0.0
+0.2
-0.1
-1.2
carbon source
adipate (C)
-0.2
+0.3
-0.1
+0.1
-0.9
carbon source
Valeric (C)
+0.1
-0.3
+0.5
+0.1
-0.8
temperature
R2A 23C
+0.2
+0.3
-0.1
+0.2
-0.8
carbon source
Disodium Glutarate (C)
-0.0
-0.5
-0.2
-0.2
+0.8
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