Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS36380 and RR42_RS36385 are separated by 205 nucleotides
RR42_RS36385 and RR42_RS36390 are separated by 292 nucleotides
RR42_RS36390 and RR42_RS36395 are separated by 47 nucleotides
RR42_RS36395 and RR42_RS36400 are separated by 6 nucleotides
RR42_RS36380: RR42_RS36380 - LuxR family transcriptional regulator, at 3,613,659 to 3,616,430
_RS36380
RR42_RS36385: RR42_RS36385 - acyl-CoA synthetase, at 3,616,636 to 3,618,180
_RS36385
RR42_RS36390: RR42_RS36390 - acyl-CoA dehydrogenase, at 3,618,473 to 3,619,618
_RS36390
RR42_RS36395: RR42_RS36395 - acyl-CoA dehydrogenase, at 3,619,666 to 3,620,901
_RS36395
RR42_RS36400: RR42_RS36400 - hypothetical protein, at 3,620,908 to 3,621,306
_RS36400
Group
Condition
RR42
_RS36380
RR42
_RS36385
RR42
_RS36390
RR42
_RS36395
RR42
_RS36400
stress
R2A with Cisplatin 0.001 mg/ml
-0.8
+0.1
-0.4
+0.0
-3.6
stress
R2A with Nickel (II) chloride 0.35 mM
+0.0
-0.3
-0.1
-0.4
-3.3
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.5
-0.2
-0.0
-0.5
-3.1
carbon source
4-Hydroxybenzoic Acid (C)
-0.3
+0.0
-0.0
-0.1
-2.9
carbon source
propionate (C)
-0.2
+0.0
-0.1
-0.2
-2.1
carbon source
Protocatechuic Acid (C)
+0.2
+0.0
-0.3
+0.0
-2.4
carbon source
Valeric (C)
-0.3
-0.3
-0.1
-0.0
-1.6
carbon source
succinate (C)
+0.3
+0.1
-0.3
-0.2
-2.1
carbon source
Dodecandioic (C)
+0.4
-0.2
-0.1
+0.1
-2.3
carbon source
Pimelic (C)
+0.1
-0.3
-0.5
-0.3
-1.1
nitrogen source
L-Serine (N)
-0.6
-0.0
-0.0
+0.1
-1.5
carbon source
adipate (C)
+0.2
-0.2
-0.4
+0.2
-1.7
carbon source
propionate (C)
-0.3
-0.2
-0.2
-0.1
-1.2
carbon source
Heptanoic (C)
+0.5
+0.1
-0.1
-0.2
-2.2
carbon source
Octanoic (C)
-0.1
+0.1
-0.1
+0.1
-1.6
carbon source
D-Fructose (C)
-0.3
+0.1
-0.1
+0.3
-1.8
carbon source
Azelaic (C)
+0.2
+0.1
-0.3
-0.2
-1.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.5
-0.0
-0.1
+0.4
-1.2
carbon source
succinate (C)
+0.3
-0.2
-0.4
-0.1
-1.3
nitrogen source
L-Valine (N)
+0.0
+0.1
+0.0
+0.1
-1.8
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.4
-0.0
-0.4
+0.2
-1.6
carbon source
Hexanoic (C)
+0.5
+0.0
-0.2
-0.0
-1.6
carbon source
Valeric (C)
+0.4
-0.1
-0.4
+0.0
-1.2
carbon source
D,L-Lactate (C)
+0.0
+0.0
+0.4
-0.1
-1.5
carbon source
Suberic (C)
+0.4
-0.2
-0.2
-0.3
-0.8
nitrogen source
Glucuronamide (N)
+0.1
+0.1
-0.1
+0.4
-1.4
stress
R2A with Dimethyl Sulfoxide 5 vol%
+0.3
+0.0
+0.4
+0.1
-1.0
nitrogen source
L-Isoleucine (N)
-0.1
-0.1
-0.2
+0.2
+1.3
stress
R2A with Zinc 0.1 mM
-0.3
-0.0
+0.4
+0.2
+1.2
nitrogen source
L-Serine (N)
+0.1
-0.1
-0.1
+0.2
+1.4
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