Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS35905 and RR42_RS35910 are separated by 125 nucleotidesRR42_RS35910 and RR42_RS35915 are separated by 223 nucleotidesRR42_RS35915 and RR42_RS35920 are separated by 100 nucleotidesRR42_RS35920 and RR42_RS35925 are separated by 20 nucleotides RR42_RS35905: RR42_RS35905 - LacI family transcriptional regulator, at 3,502,278 to 3,503,297 _RS35905 RR42_RS35910: RR42_RS35910 - short-chain dehydrogenase, at 3,503,423 to 3,504,154 _RS35910 RR42_RS35915: RR42_RS35915 - beta-ketoadipyl CoA thiolase, at 3,504,378 to 3,505,580 _RS35915 RR42_RS35920: RR42_RS35920 - 3-oxoadipate CoA-transferase, at 3,505,681 to 3,506,328 _RS35920 RR42_RS35925: RR42_RS35925 - 3-oxoadipate CoA-transferase, at 3,506,349 to 3,507,032 _RS35925
Group Condition RR42_RS35905 RR42_RS35910 RR42_RS35915 RR42_RS35920 RR42_RS35925
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.2 -2.6 -2.2 -1.8
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.1 -2.2 -2.1 -2.1
carbon source Protocatechuic Acid (C) -0.4 +0.2 -1.4 -1.7 -1.2
carbon source Suberic (C) +0.2 +0.4 -3.4 -0.5 -1.0
carbon source Protocatechuic Acid (C) -0.1 -0.3 -1.9 -0.9 -0.9
carbon source Carbon source Phenylacetic 2.5 mM +0.0 -0.1 -1.8 -0.6 -0.9
carbon source Dodecandioic (C) -0.1 -0.0 -2.1 -0.5 -0.5
carbon source Carbon source Phenylacetic 2.5 mM -0.0 +0.1 -2.0 -0.6 -0.6
carbon source Suberic (C) -0.1 -0.0 -1.9 -0.4 -0.3
carbon source Dodecandioic (C) -0.2 +0.1 -1.4 -0.4 -0.7
nitrogen source casaminos (N) -0.2 -0.5 -0.9 -0.2 -0.3
carbon source Pimelic (C) -0.4 +0.1 -1.3 -0.2 -0.4
r2a R2A -0.2 -0.5 -0.6 -0.4 -0.3
stress R2A with Cobalt chloride 0.5 mM +0.1 -0.3 -0.3 -0.8 -0.6
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.3 -0.4 -0.4 -0.5 -0.2
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.1 -0.2 -0.3 -0.7 -0.3
carbon source Pimelic (C) -0.3 +0.4 -1.4 +0.2 -0.4
stress R2A with Nickel (II) chloride 0.35 mM -0.3 -0.3 -0.8 +0.0 -0.1
carbon source L-Tryptophan (C) +0.0 +0.2 -1.0 -0.3 -0.2
nitrogen source Glucuronamide (N) -0.6 -0.4 +0.2 -0.3 -0.2
carbon source Azelaic (C) -0.1 +0.3 -0.5 -0.3 -0.4
carbon source Azelaic (C) -0.1 +0.3 -0.7 -0.1 -0.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.5 -0.3 +0.4 -0.4 -0.2
lb LB -0.8 -0.3 -0.4 +0.1 +0.6
stress R2A with Vancomycin 0.5 mg/ml +0.1 -0.1 +0.3 -0.7 -0.1
carbon source Disodium Glutarate (C) -0.6 +0.5 -0.2 +0.4 +0.0
carbon source Disodium Glutarate (C) -0.1 +0.6 +0.0 +0.4 +0.3
stress R2A with nitrate 200 mM +0.1 +0.4 +0.3 +0.4 +0.3
carbon source adipate (C) -3.5 +2.2 -1.4 +5.5 +1.5
carbon source adipate (C) -2.3 +2.1 -1.3 +5.1 +1.6
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