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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS35770 and RR42_RS35775 are separated by 263 nucleotides
RR42_RS35775 and RR42_RS35780 are separated by 10 nucleotides
RR42_RS35780 and RR42_RS35785 are separated by 88 nucleotides
RR42_RS35785 and RR42_RS35790 are separated by 23 nucleotides
RR42_RS35770: RR42_RS35770 - flagellar biosynthesis protein FlhB, at 3,473,757 to 3,474,899
_RS35770
RR42_RS35775: RR42_RS35775 - chemotaxis protein CheZ, at 3,475,163 to 3,475,798
_RS35775
RR42_RS35780: RR42_RS35780 - chemotaxis protein CheY, at 3,475,809 to 3,476,204
_RS35780
RR42_RS35785: RR42_RS35785 - chemotaxis protein, at 3,476,293 to 3,477,369
_RS35785
RR42_RS35790: RR42_RS35790 - chemotaxis protein CheD, at 3,477,393 to 3,478,055
_RS35790
Group
Condition
RR42
_RS35770
RR42
_RS35775
RR42
_RS35780
RR42
_RS35785
RR42
_RS35790
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.0
-0.3
-3.8
-0.5
-0.0
nitrogen source
L-Glutamine (N)
-0.7
-0.0
-0.4
-0.9
-0.9
nitrogen source
L-Serine (N)
-0.6
-0.2
-1.0
-0.2
-0.6
temperature
R2A 23C
-0.3
-0.3
-0.7
-0.4
-0.6
stress
R2A with nitrate 200 mM
-0.6
-0.3
-1.0
-0.2
-0.2
temperature
R2A 23C
-0.1
-0.5
-0.5
-0.4
-0.7
nitrogen source
casaminos (N)
-1.2
-0.1
-0.1
-0.3
-0.4
lb
LB
+0.3
-1.1
-1.5
-0.3
+0.5
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.4
-0.5
-0.5
+0.2
-0.3
carbon source
L-Alanine (C)
+0.4
+0.1
-1.1
-0.2
-0.4
stress
R2A with Zinc 0.1 mM
-0.9
+0.1
-1.0
+0.2
+0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.3
+0.2
+1.1
-1.1
-0.6
carbon source
Valeric (C)
-0.4
+0.5
+0.4
-0.4
-0.5
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.6
-0.8
+0.4
-0.2
-0.3
nitrogen source
L-Tryptophan (N)
+0.3
+0.4
-1.1
-0.1
+0.2
stress
R2A with Sisomicin 0.035 mg/ml
-0.2
-0.7
+0.5
-0.1
+0.4
stress
R2A with Cisplatin 0.001 mg/ml
-0.5
-0.3
+0.4
+0.2
+0.5
carbon source
Protocatechuic Acid (C)
+0.4
+0.9
-0.6
-0.2
+0.0
carbon source
propionate (C)
-0.2
-0.5
+0.6
+0.3
+0.6
carbon source
Dodecandioic (C)
-0.4
+0.5
+1.0
-0.0
+0.3
stress
R2A with Lomefloxacin 0.001 mM
+0.1
+0.1
+1.5
+0.2
-0.4
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.4
+0.5
+0.7
-0.2
+0.4
stress
R2A with nitrate 200 mM
+0.8
+0.0
+0.5
+0.3
+0.3
stress
R2A with Nickel (II) chloride 0.35 mM
+0.7
+0.1
+0.9
+0.1
+0.4
stress
R2A with Cobalt chloride 0.5 mM
-0.3
+0.0
+1.1
+0.6
+0.8
stress
R2A with Nickel (II) chloride 0.25 mM
+0.5
+0.4
+0.4
+0.4
+0.6
stress
R2A with nitrate 150 mM
+0.5
+0.4
+0.4
+0.3
+0.7
carbon source
adipate (C)
+1.1
-0.2
+0.5
+0.3
+0.6
stress
R2A with Cobalt chloride 0.3 mM
+1.0
+0.5
+0.2
+0.3
+0.6
stress
R2A with Nickel (II) chloride 0.5 mM
+1.4
+0.3
+0.2
+0.7
+1.2
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RR42_RS35780
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