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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS35760 and RR42_RS35765 are separated by 13 nucleotides
RR42_RS35765 and RR42_RS35770 overlap by 4 nucleotides
RR42_RS35770 and RR42_RS35775 are separated by 263 nucleotides
RR42_RS35775 and RR42_RS35780 are separated by 10 nucleotides
RR42_RS35760: RR42_RS35760 - flagellar biosynthesis regulator FlhF, at 3,469,344 to 3,471,659
_RS35760
RR42_RS35765: RR42_RS35765 - flagellar biosynthesis protein FlhA, at 3,471,673 to 3,473,760
_RS35765
RR42_RS35770: RR42_RS35770 - flagellar biosynthesis protein FlhB, at 3,473,757 to 3,474,899
_RS35770
RR42_RS35775: RR42_RS35775 - chemotaxis protein CheZ, at 3,475,163 to 3,475,798
_RS35775
RR42_RS35780: RR42_RS35780 - chemotaxis protein CheY, at 3,475,809 to 3,476,204
_RS35780
Group
Condition
RR42
_RS35760
RR42
_RS35765
RR42
_RS35770
RR42
_RS35775
RR42
_RS35780
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
+0.2
-0.0
-0.3
-3.8
stress
R2A with Zinc 0.1 mM
-0.6
-0.3
-0.9
+0.1
-1.0
nitrogen source
L-Serine (N)
-0.5
-0.1
-0.6
-0.2
-1.0
stress
R2A with nitrate 200 mM
-0.2
-0.2
-0.6
-0.3
-1.0
stress
R2A with Cephalothin 0.25 mg/ml
-0.5
-0.0
-0.6
-0.6
-0.3
nitrogen source
casaminos (N)
-0.3
-0.3
-1.2
-0.1
-0.1
temperature
R2A 23C
-0.3
-0.5
-0.1
-0.5
-0.5
temperature
R2A 23C
-0.2
-0.3
-0.3
-0.3
-0.7
nitrogen source
Glucuronamide (N)
-0.4
-0.3
-0.3
-0.2
-0.6
stress
R2A with Chloride 300 mM
-0.3
-0.5
-0.6
-0.1
-0.4
nitrogen source
L-Glutamine (N)
-0.5
-0.2
-0.7
-0.0
-0.4
lb
LB
+0.2
+0.6
+0.3
-1.1
-1.5
carbon source
L-Alanine (C)
-0.0
-0.3
+0.4
+0.1
-1.1
nitrogen source
L-Tryptophan (N)
+0.2
-0.1
+0.3
+0.4
-1.1
stress
R2A with Nickel (II) chloride 0.35 mM
-0.4
+0.1
+0.8
+0.3
-0.7
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.4
+0.3
+0.6
-0.8
+0.4
carbon source
Protocatechuic Acid (C)
-0.3
-0.3
+0.4
+0.9
-0.6
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.3
-0.3
+0.2
+1.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
-0.1
-0.4
+0.4
+0.7
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.2
-0.4
+0.2
-0.0
+1.3
carbon source
Dodecandioic (C)
+0.1
+0.0
-0.4
+0.5
+1.0
stress
R2A with Lomefloxacin 0.001 mM
-0.2
-0.0
+0.1
+0.1
+1.5
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.1
-0.1
+0.4
+0.5
+0.7
carbon source
adipate (C)
+0.5
+0.3
+0.5
+0.6
-0.1
stress
R2A with nitrate 200 mM
+0.2
+0.2
+0.8
+0.0
+0.5
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
+0.1
+0.7
+0.1
+0.9
stress
R2A with Nickel (II) chloride 0.25 mM
+0.4
+0.1
+0.5
+0.4
+0.4
carbon source
adipate (C)
+0.4
+0.5
+1.1
-0.2
+0.5
stress
R2A with Cobalt chloride 0.3 mM
+0.4
+0.4
+1.0
+0.5
+0.2
stress
R2A with Nickel (II) chloride 0.5 mM
+0.1
+0.6
+1.4
+0.3
+0.2
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RR42_RS35770
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