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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS35640 and RR42_RS35645 overlap by 10 nucleotides
RR42_RS35645 and RR42_RS35650 are separated by 67 nucleotides
RR42_RS35650 and RR42_RS35655 are separated by 120 nucleotides
RR42_RS35655 and RR42_RS35660 are separated by 927 nucleotides
RR42_RS35640: RR42_RS35640 - MBL fold metallo-hydrolase, at 3,448,685 to 3,449,440
_RS35640
RR42_RS35645: RR42_RS35645 - MFS transporter, at 3,449,431 to 3,450,732
_RS35645
RR42_RS35650: RR42_RS35650 - hypothetical protein, at 3,450,800 to 3,451,204
_RS35650
RR42_RS35655: RR42_RS35655 - hypothetical protein, at 3,451,325 to 3,451,780
_RS35655
RR42_RS35660: RR42_RS35660 - hypothetical protein, at 3,452,708 to 3,453,019
_RS35660
Group
Condition
RR42
_RS35640
RR42
_RS35645
RR42
_RS35650
RR42
_RS35655
RR42
_RS35660
stress
R2A with Zinc 0.1 mM
+0.1
-0.3
-0.0
-0.2
-0.9
lb
LB
-0.1
-0.5
+0.6
-0.0
-0.8
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.4
-0.4
+0.2
+0.2
-0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.1
-0.6
-0.6
+0.1
+0.6
r2a
R2A
+0.1
+0.2
-0.5
+0.0
-0.4
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.6
-0.6
+0.6
+0.0
+0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.5
-0.0
+0.3
+0.2
-0.4
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.1
-0.0
+0.3
+0.2
-0.6
stress
R2A with Nickel (II) chloride 0.25 mM
-0.0
+0.7
-0.2
+0.0
-0.3
nitrogen source
Glucuronamide (N)
+0.2
-0.0
-0.2
-0.3
+0.6
carbon source
Protocatechuic Acid (C)
+0.2
+0.5
-0.2
+0.3
-0.4
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.1
+1.0
-0.4
-0.0
-0.2
stress
R2A with nitrate 200 mM
+0.1
+0.7
+0.0
-0.1
-0.3
stress
R2A with Vancomycin 0.5 mg/ml
-0.0
+1.1
-0.4
-0.3
+0.1
carbon source
adipate (C)
+0.5
+0.2
+0.3
-0.0
-0.1
stress
R2A with Cobalt chloride 0.5 mM
+0.2
+1.1
-0.4
-0.3
+0.3
carbon source
Azelaic (C)
+0.4
+0.2
+0.1
-0.2
+0.4
carbon source
Heptanoic (C)
+0.0
+0.4
+0.2
-0.2
+0.6
carbon source
L-Leucine (C)
+0.3
+0.3
+0.1
-0.1
+0.5
stress
R2A with nitrate 150 mM
-0.0
+0.9
-0.1
+0.2
+0.1
temperature
R2A 37C
+0.3
+0.2
+0.2
+0.1
+0.5
stress
R2A with Nickel (II) chloride 0.25 mM
-0.0
+0.6
-0.1
+0.3
+0.6
stress
R2A with Lomefloxacin 0.00075 mM
-0.1
+0.8
+0.4
+0.1
+0.1
stress
R2A with Vancomycin 0.5 mg/ml
-0.1
+1.6
-0.2
-0.1
+0.2
carbon source
Octanoic (C)
+0.2
+0.4
+0.3
-0.2
+0.8
stress
R2A with Nickel (II) chloride 0.35 mM
+0.0
+1.6
-0.3
+0.2
+0.1
stress
R2A with Lomefloxacin 0.001 mM
-0.0
+2.3
-0.5
-0.0
+0.2
stress
R2A with Cobalt chloride 0.3 mM
+0.3
+1.6
-0.5
+0.3
+0.9
stress
R2A with Nickel (II) chloride 0.35 mM
+0.5
+3.5
-0.1
-0.1
-1.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.3
+3.9
+0.3
+0.2
+0.5
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RR42_RS35645
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RR42_RS35650
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RR42_RS35655
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RR42_RS35660
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