Private Fitness
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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS35570 and RR42_RS35575 are separated by 1374 nucleotides
RR42_RS35575 and RR42_RS35580 are separated by 363 nucleotides
RR42_RS35580 and RR42_RS35585 are separated by 929 nucleotides
RR42_RS35585 and RR42_RS35590 are separated by 1062 nucleotides
RR42_RS35570: RR42_RS35570 - haloacid dehalogenase, at 3,434,317 to 3,435,192
_RS35570
RR42_RS35575: RR42_RS35575 - diguanylate cyclase, at 3,436,567 to 3,438,306
_RS35575
RR42_RS35580: RR42_RS35580 - hypothetical protein, at 3,438,670 to 3,440,229
_RS35580
RR42_RS35585: RR42_RS35585 - hypothetical protein, at 3,441,159 to 3,441,617
_RS35585
RR42_RS35590: RR42_RS35590 - hypothetical protein, at 3,442,680 to 3,443,387
_RS35590
Group
Condition
RR42
_RS35570
RR42
_RS35575
RR42
_RS35580
RR42
_RS35585
RR42
_RS35590
stress
R2A with Cobalt chloride 0.3 mM
-0.2
-0.0
+0.1
-0.3
-0.1
stress
R2A with Cobalt chloride 0.5 mM
+0.1
+0.0
+0.1
-0.1
-0.4
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.1
-0.1
+0.0
+0.2
-0.3
carbon source
Carbon source D,L-Lactate 10 mM
-0.0
+0.2
-0.0
-0.5
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
+0.1
-0.2
-0.3
-0.1
carbon source
Protocatechuic Acid (C)
+0.4
+0.3
-0.1
-0.3
-0.4
carbon source
Dodecandioic (C)
+0.1
+0.1
-0.2
-0.3
+0.1
nitrogen source
L-Serine (N)
+0.3
-0.1
-0.1
-0.3
+0.1
carbon source
propionate (C)
+0.2
+0.1
+0.0
-0.2
-0.2
carbon source
Hexanoic (C)
-0.1
+0.2
+0.1
-0.1
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.2
-0.1
-0.2
+0.1
+0.1
carbon source
butyrate (C)
+0.3
+0.0
-0.2
+0.1
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.0
-0.3
-0.0
+0.4
-0.0
stress
R2A with Lomefloxacin 0.001 mM
-0.1
+0.2
+0.2
-0.2
-0.0
carbon source
pyruvate (C)
+0.3
-0.1
-0.1
+0.2
-0.1
lb
LB
+0.3
+0.1
-0.2
+0.1
-0.1
nitrogen source
Glucuronamide (N)
-0.3
+0.0
+0.1
+0.2
+0.2
carbon source
L-Tryptophan (C)
+0.2
-0.1
-0.1
+0.3
-0.0
stress
R2A with Zinc 0.1 mM
-0.1
-0.0
-0.1
+0.4
+0.2
stress
R2A with copper (II) chloride 0.25 mM
+0.0
+0.2
+0.0
+0.4
-0.2
nitrogen source
L-Glutamine (N)
+0.1
+0.3
-0.0
-0.2
+0.3
stress
R2A with Cisplatin 0.001 mg/ml
+0.3
-0.0
+0.0
+0.4
-0.0
nitrogen source
Glycine (N)
-0.1
+0.0
+0.1
+0.3
+0.3
carbon source
succinate (C)
+0.3
+0.2
+0.1
+0.0
+0.2
carbon source
Valeric (C)
+0.3
+0.1
-0.1
+0.1
+0.3
carbon source
L-Asparagine (C)
+0.3
+0.2
+0.1
-0.0
+0.2
carbon source
Heptanoic (C)
+0.1
+0.1
+0.2
+0.4
-0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.1
+0.1
+0.1
+0.5
+0.1
nitrogen source
D-Alanine (N)
+0.2
+0.2
+0.2
+0.3
+0.4
carbon source
L-Asparagine (C)
+0.3
+0.3
+0.3
+0.5
+0.4
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RR42_RS35580
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