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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS35460 and RR42_RS35465 are separated by 121 nucleotides
RR42_RS35465 and RR42_RS35470 are separated by 542 nucleotides
RR42_RS35470 and RR42_RS35475 are separated by 343 nucleotides
RR42_RS35475 and RR42_RS35480 are separated by 420 nucleotides
RR42_RS35460: RR42_RS35460 - membrane protein, at 3,406,477 to 3,407,295
_RS35460
RR42_RS35465: RR42_RS35465 - cytochrome C, at 3,407,417 to 3,408,199
_RS35465
RR42_RS35470: RR42_RS35470 - hypothetical protein, at 3,408,742 to 3,409,089
_RS35470
RR42_RS35475: RR42_RS35475 - thiosulfate sulfurtransferase, at 3,409,433 to 3,410,305
_RS35475
RR42_RS35480: RR42_RS35480 - MFS transporter, at 3,410,726 to 3,411,925
_RS35480
Group
Condition
RR42
_RS35460
RR42
_RS35465
RR42
_RS35470
RR42
_RS35475
RR42
_RS35480
stress
R2A with Nickel (II) chloride 0.5 mM
-0.3
-0.1
-0.2
-0.3
-0.2
carbon source
Valeric (C)
-0.3
-0.4
-0.0
+0.1
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.1
-0.3
+0.1
-0.3
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.3
+0.1
-0.0
-0.6
+0.1
carbon source
L-Lactate (C)
-0.2
+0.1
-0.3
-0.2
+0.1
lb
LB
+0.0
-0.1
-0.5
-0.0
+0.3
carbon source
Protocatechuic Acid (C)
-0.4
-0.1
+0.3
+0.2
-0.0
carbon source
adipate (C)
+0.0
-0.3
-0.0
+0.5
-0.2
stress
R2A with Cobalt chloride 0.5 mM
-0.3
+0.1
-0.2
+0.3
+0.1
carbon source
Dodecandioic (C)
-0.4
+0.1
-0.0
+0.2
+0.2
nitrogen source
Glycine (N)
-0.1
-0.1
+0.4
-0.2
+0.2
carbon source
Disodium Glutarate (C)
-0.3
+0.1
+0.1
+0.4
-0.1
stress
R2A with Zinc 0.1 mM
-0.1
+0.3
-0.1
-0.1
+0.3
carbon source
Ethanol (C)
+0.3
+0.1
-0.2
+0.2
-0.1
stress
R2A with Lomefloxacin 0.001 mM
+0.2
+0.2
+0.3
-0.3
+0.2
stress
R2A with Nickel (II) chloride 0.35 mM
+0.3
+0.2
-0.2
-0.1
+0.3
temperature
R2A 37C
+0.3
-0.1
+0.1
+0.3
+0.2
nitrogen source
L-Lysine (N)
+0.4
-0.1
+0.2
+0.2
+0.3
carbon source
L-Leucine (C)
+0.3
+0.2
+0.2
+0.4
-0.1
nitrogen source
D-Alanine (N)
+0.0
+0.0
+0.2
+0.6
+0.2
nitrogen source
D-Alanine (N)
+0.5
+0.0
+0.1
+0.2
+0.1
carbon source
L-Asparagine (C)
+0.3
+0.3
-0.0
+0.4
+0.4
r2a
R2A
+0.4
+0.3
+0.2
+0.1
+0.3
nitrogen source
L-Leucine (N)
+0.2
+0.2
+0.2
+0.5
+0.2
nitrogen source
Glucuronamide (N)
+0.5
+0.0
+0.3
+0.2
+0.3
carbon source
L-Asparagine (C)
+0.2
+0.1
+0.2
+0.6
+0.2
nitrogen source
casaminos (N)
+0.3
+0.2
+0.4
+0.0
+0.5
carbon source
Protocatechuic Acid (C)
+0.3
-0.0
+0.3
+0.5
+0.2
nitrogen source
L-Glutamine (N)
+0.4
+0.2
+0.0
+0.3
+0.4
nitrogen source
L-Serine (N)
+0.3
+0.1
+0.4
+0.2
+0.4
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