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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS35410 and RR42_RS35415 are separated by 243 nucleotides
RR42_RS35415 and RR42_RS35420 are separated by 324 nucleotides
RR42_RS35420 and RR42_RS35425 are separated by 130 nucleotides
RR42_RS35425 and RR42_RS35430 are separated by 585 nucleotides
RR42_RS35410: RR42_RS35410 - arsenic resistance operon repressor, at 3,398,154 to 3,398,525
_RS35410
RR42_RS35415: RR42_RS35415 - hypothetical protein, at 3,398,769 to 3,399,329
_RS35415
RR42_RS35420: RR42_RS35420 - hypothetical protein, at 3,399,654 to 3,400,289
_RS35420
RR42_RS35425: RR42_RS35425 - aspartate carbamoyltransferase, at 3,400,420 to 3,400,941
_RS35425
RR42_RS35430: RR42_RS35430 - hypothetical protein, at 3,401,527 to 3,401,907
_RS35430
Group
Condition
RR42
_RS35410
RR42
_RS35415
RR42
_RS35420
RR42
_RS35425
RR42
_RS35430
stress
R2A with Cobalt chloride 0.3 mM
-0.6
-0.2
-0.1
-0.4
-0.4
carbon source
Disodium Glutarate (C)
-0.0
-0.2
-0.3
-0.4
-0.3
carbon source
Disodium Glutarate (C)
-0.4
+0.0
-0.1
-0.5
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.3
-0.1
-0.4
-0.0
-0.2
carbon source
propionate (C)
-0.0
-0.1
-0.1
-0.5
-0.3
nitrogen source
L-Tryptophan (N)
+0.2
-0.5
+0.1
-0.3
-0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.4
-0.0
-0.3
-0.2
+0.1
stress
R2A with Lomefloxacin 0.001 mM
-1.1
+0.1
-0.1
+0.4
-0.1
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
-0.0
-0.3
-0.1
+0.2
-0.3
nitrogen source
L-Phenylalanine (N)
+0.4
-0.0
-0.1
-0.5
-0.3
stress
R2A with Thallium(I) acetate 0.001 mg/ml
+0.1
-0.4
-0.0
-0.4
+0.2
nitrogen source
L-Lysine (N)
+0.3
-0.2
+0.1
-0.4
-0.2
carbon source
Valeric (C)
+0.0
+0.2
-0.1
-0.6
+0.2
carbon source
D-Fructose (C)
+0.2
-0.0
+0.2
-0.5
-0.1
carbon source
Carbon source Phenylacetic 2.5 mM
+0.3
-0.2
-0.1
-0.4
+0.2
nitrogen source
nitrite (N)
+0.4
-0.2
-0.2
-0.2
+0.1
stress
R2A with Cobalt chloride 0.5 mM
+0.3
+0.1
+0.1
-0.1
-0.5
lb
LB
+0.4
-0.1
-0.0
-0.3
+0.2
nitrogen source
L-Isoleucine (N)
+0.4
-0.2
+0.2
-0.3
+0.0
stress
R2A with Cisplatin 0.001 mg/ml
+0.3
-0.0
+0.3
-0.1
-0.3
nitrogen source
L-Leucine (N)
+0.2
-0.4
+0.2
+0.1
+0.1
stress
R2A with Cisplatin 0.001 mg/ml
+0.3
-0.2
+0.0
+0.4
-0.0
stress
R2A with copper (II) chloride 0.25 mM
+0.3
+0.1
+0.2
-0.2
+0.3
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+0.4
+0.1
+0.2
-0.1
+0.3
stress
R2A with Chloride 300 mM
+0.1
+0.2
+0.1
+0.4
+0.3
stress
R2A with Nickel (II) chloride 0.35 mM
+0.3
+0.5
+0.1
+0.2
+0.0
temperature
R2A 37C
+0.2
+0.3
+0.2
+0.0
+0.4
r2a
R2A
+0.3
+0.2
+0.4
+0.1
+0.2
stress
R2A with nitrate 200 mM
+0.3
+0.3
+0.2
+0.4
+0.5
carbon source
L-Asparagine (C)
+0.6
+0.5
+0.3
+0.3
+0.4
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RR42_RS35420
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