Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntRR42_RS35100 and RR42_RS35105 are separated by 169 nucleotidesRR42_RS35105 and RR42_RS35110 are separated by 88 nucleotidesRR42_RS35110 and RR42_RS35115 are separated by 152 nucleotidesRR42_RS35115 and RR42_RS35120 are separated by 52 nucleotides RR42_RS35100: RR42_RS35100 - TetR family transcriptional regulator, at 3,327,552 to 3,328,160 _RS35100 RR42_RS35105: RR42_RS35105 - hydrolase, at 3,328,330 to 3,329,418 _RS35105 RR42_RS35110: RR42_RS35110 - hypothetical protein, at 3,329,507 to 3,329,689 _RS35110 RR42_RS35115: RR42_RS35115 - riboflavin synthase subunit beta, at 3,329,842 to 3,330,312 _RS35115 RR42_RS35120: RR42_RS35120 - benzoyl-CoA oxygenase, at 3,330,365 to 3,331,645 _RS35120
Group Condition RR42_RS35100 RR42_RS35105 RR42_RS35110 RR42_RS35115 RR42_RS35120
carbon source Protocatechuic Acid (C) -0.7 -0.2 -2.5 +0.6 +0.2
nitrogen source L-Glutamine (N) -0.1 -0.5 -1.4 -0.3 +0.1
carbon source propionate (C) -0.0 -0.0 -1.5 -0.3 -0.1
carbon source butyrate (C) -0.5 -0.1 -0.7 -0.2 -0.2
stress R2A with Cobalt chloride 0.5 mM -0.2 +0.1 -1.5 +0.5 -0.3
carbon source L-Histidine (C) +0.1 -0.4 -0.8 +0.1 -0.1
nitrogen source L-Isoleucine (N) +0.3 +0.1 -1.0 -0.1 -0.2
stress R2A with Nickel (II) chloride 0.35 mM +0.3 +0.2 -1.1 -0.0 -0.1
carbon source L-Lactate (C) -0.4 -0.2 -0.4 +0.4 -0.1
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.2 -0.1 -1.0 +0.3 +0.1
carbon source Pimelic (C) -0.3 -0.4 +0.6 -0.5 +0.1
nitrogen source casaminos (N) +0.5 -0.3 -0.5 -0.2 +0.1
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +0.4 +0.2 -0.6 +0.1 -0.2
nitrogen source L-Tryptophan (N) +0.5 -0.2 -0.7 +0.3 -0.1
carbon source propionate (C) -0.2 -0.5 +0.5 +0.2 -0.2
lb LB -0.3 +0.2 +0.5 +0.1 -0.4
stress R2A with Chlorite 4 mM -0.0 +0.3 -0.8 +0.8 +0.0
nitrogen source nitrite (N) +0.1 +0.1 -0.6 +0.6 +0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.4 +0.4 +1.1 -0.5 -0.2
stress R2A with Nickel (II) chloride 0.5 mM +0.5 -0.2 -0.2 +0.4 -0.1
stress R2A with D-Cycloserine 0.01 mg/ml -0.2 +0.5 +0.6 -0.3 -0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.1 +0.4 -0.8 +0.7 +0.2
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.4 -0.4 +0.8 -0.0 -0.0
stress R2A with Dimethyl Sulfoxide 5 vol% +0.2 +0.5 +0.8 -0.4 -0.1
carbon source Suberic (C) -0.2 +0.2 -0.1 +0.9 +0.2
stress R2A with Polymyxin B sulfate 0.005 mg/ml +0.4 -0.2 +0.7 +0.3 +0.1
carbon source Hexanoic (C) -0.3 +0.4 +1.1 -0.1 +0.2
carbon source Pimelic (C) -0.1 +0.2 +0.8 +0.7 +0.1
carbon source Hexanoic (C) -0.1 +0.1 +0.8 +0.8 +0.1
stress R2A with Lomefloxacin 0.00075 mM +0.3 +0.4 +1.2 +0.2 +0.3
remove
RR42_RS35100
plot
remove
RR42_RS35105
plot
remove
RR42_RS35110
remove
RR42_RS35115
plot
remove
RR42_RS35120
plot