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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS34200 and RR42_RS34205 are separated by 324 nucleotides
RR42_RS34205 and RR42_RS34210 are separated by 220 nucleotides
RR42_RS34210 and RR42_RS34215 are separated by 257 nucleotides
RR42_RS34215 and RR42_RS34220 are separated by 278 nucleotides
RR42_RS34200: RR42_RS34200 - membrane protein, at 3,098,429 to 3,099,205
_RS34200
RR42_RS34205: RR42_RS34205 - hypothetical protein, at 3,099,530 to 3,099,880
_RS34205
RR42_RS34210: RR42_RS34210 - hypothetical protein, at 3,100,101 to 3,100,490
_RS34210
RR42_RS34215: RR42_RS34215 - ferredoxin, at 3,100,748 to 3,101,068
_RS34215
RR42_RS34220: RR42_RS34220 - pyruvate dehydrogenase, at 3,101,347 to 3,104,022
_RS34220
Group
Condition
RR42
_RS34200
RR42
_RS34205
RR42
_RS34210
RR42
_RS34215
RR42
_RS34220
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.1
-0.1
-0.3
-3.3
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.4
+0.2
+0.4
-3.3
-0.2
carbon source
L-Tryptophan (C)
-0.3
-0.4
-0.2
-2.1
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.8
-0.7
-0.9
-0.3
lb
LB
-0.5
-0.1
-3.7
+1.5
+0.1
carbon source
Octanoic (C)
-0.2
-0.1
-0.3
-1.9
+0.1
carbon source
Suberic (C)
+0.1
+0.1
-1.3
-1.1
-0.0
carbon source
L-Phenylalanine (C)
-0.2
+0.0
-0.1
-2.1
+0.2
carbon source
Disodium Glutarate (C)
+0.1
-0.1
-0.6
-1.5
+0.0
nitrogen source
L-Lysine (N)
+0.0
-0.5
-0.3
-1.3
+0.1
stress
R2A with Zinc 0.1 mM
+0.2
-0.6
-0.3
-1.3
+0.0
carbon source
succinate (C)
-0.2
-0.7
+0.2
-1.2
+0.2
carbon source
L-Proline (C)
-0.2
-0.2
+0.2
-1.6
+0.0
stress
R2A with Chlorite 4 mM
+0.0
+0.1
-0.8
-1.2
+0.1
stress
R2A with copper (II) chloride 0.25 mM
+0.2
-0.4
+0.1
-1.5
-0.1
stress
R2A with Chloride 300 mM
+0.1
+0.2
+0.4
-1.9
+0.1
nitrogen source
L-Valine (N)
+0.0
+0.3
-0.1
-2.0
+0.6
nitrogen source
L-Valine (N)
+0.1
-0.8
-0.2
-0.8
+0.7
carbon source
L-Threonine (C)
+0.0
+0.3
+0.3
-1.6
-0.0
carbon source
Heptanoic (C)
-0.1
+0.4
-0.2
-1.2
+0.1
stress
R2A with A22 0.01 mg/ml
+0.1
-0.2
+0.4
-1.2
+0.1
carbon source
pyruvate (C)
+0.1
-0.3
+0.5
-1.0
-0.0
carbon source
L-Histidine (C)
+0.1
-0.4
+0.6
-0.7
+0.0
nitrogen source
L-Leucine (N)
-0.0
-0.1
+0.6
-1.1
+0.2
stress
R2A with Cisplatin 0.001 mg/ml
-0.2
+0.0
-1.1
+1.1
-0.1
r2a
R2A
-0.1
+0.2
+0.2
+1.7
-0.1
stress
R2A with Lomefloxacin 0.00075 mM
+0.3
-0.0
+0.6
+1.2
-0.1
stress
R2A with Lomefloxacin 0.001 mM
-0.5
+0.5
-0.1
+1.9
+0.4
stress
R2A with Vancomycin 0.5 mg/ml
+0.1
+0.3
-0.3
+2.1
+0.0
stress
R2A with Cephalothin 0.25 mg/ml
-0.2
+0.4
+0.7
+1.3
-0.0
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