Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS33925 and RR42_RS33930 are separated by 58 nucleotidesRR42_RS33930 and RR42_RS33935 are separated by 3 nucleotidesRR42_RS33935 and RR42_RS33940 are separated by 29 nucleotidesRR42_RS33940 and RR42_RS33945 are separated by 87 nucleotides RR42_RS33925: RR42_RS33925 - naphthalene 1,2-dioxygenase, at 3,038,480 to 3,039,466 _RS33925 RR42_RS33930: RR42_RS33930 - salicylate hydroxylase, at 3,039,525 to 3,040,781 _RS33930 RR42_RS33935: RR42_RS33935 - salicylate hydroxylase, at 3,040,785 to 3,041,258 _RS33935 RR42_RS33940: RR42_RS33940 - naphthalene 1,2-dioxygenase, at 3,041,288 to 3,041,599 _RS33940 RR42_RS33945: RR42_RS33945 - MFS transporter, at 3,041,687 to 3,043,027 _RS33945
Group Condition RR42_RS33925 RR42_RS33930 RR42_RS33935 RR42_RS33940 RR42_RS33945
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.0 +0.1 +0.1 -1.3 -0.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.2 -0.3 +0.2 -0.2 -0.3
stress R2A with Nickel (II) chloride 0.35 mM -0.3 -0.3 -0.1 -0.3 +0.3
carbon source Hexanoic (C) -0.1 +0.1 +0.1 -0.9 +0.0
stress R2A with nitrate 200 mM +0.2 -0.0 -0.2 -0.5 +0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.2 -0.0 +0.3 +0.1
lb LB -0.2 +0.2 -0.0 -0.5 +0.3
carbon source succinate (C) -0.5 -0.0 -0.2 +0.4 +0.0
carbon source L-Alanine (C) -0.2 -0.1 -0.2 +0.5 -0.1
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.3 -0.1 +0.3 +0.2 -0.2
nitrogen source L-Tryptophan (N) +0.2 -0.2 -0.2 +0.2 -0.2
nitrogen source L-Glutamine (N) +0.2 -0.2 +0.2 -0.4 +0.0
carbon source Octanoic (C) -0.0 -0.2 -0.3 +0.5 +0.0
stress R2A with Lomefloxacin 0.00075 mM +0.1 -0.2 -0.4 +0.4 -0.0
stress R2A with Lomefloxacin 0.001 mM -0.0 -0.1 +0.5 -0.4 -0.0
r2a R2A -0.1 +0.0 -0.3 +0.4 +0.2
nitrogen source L-Asparagine (N) -0.3 -0.1 +0.0 +0.5 +0.1
carbon source Valeric (C) +0.5 -0.2 +0.1 -0.2 +0.0
carbon source L-Phenylalanine (C) -0.4 -0.1 +0.0 +0.4 +0.3
carbon source Ethanol (C) -0.2 +0.1 -0.1 +0.8 -0.3
nitrogen source L-Valine (N) -0.3 +0.0 -0.1 +0.6 -0.0
carbon source L-Lactate (C) -0.4 -0.0 +0.0 +0.5 +0.3
carbon source L-Histidine (C) -0.3 -0.2 -0.0 +0.9 -0.0
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.1 +0.2 -0.1 +0.2 +0.3
nitrogen source L-Serine (N) -0.2 +0.1 -0.0 +0.5 +0.3
carbon source a-Ketoglutaric (C) -0.2 +0.1 +0.2 +0.5 +0.0
stress R2A with Cobalt chloride 0.5 mM +0.1 +0.1 -0.1 +0.8 -0.0
stress R2A with Cisplatin 0.001 mg/ml +0.1 -0.2 +0.1 +0.7 +0.3
carbon source L-Leucine (C) -0.2 -0.0 +0.3 +0.7 +0.1
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.2 +0.0 +0.1 +0.8 -0.1
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RR42_RS33925
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RR42_RS33945
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