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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS33635 and RR42_RS33640 are separated by 873 nucleotides
RR42_RS33640 and RR42_RS33645 are separated by 388 nucleotides
RR42_RS33645 and RR42_RS33650 are separated by 1197 nucleotides
RR42_RS33650 and RR42_RS33655 are separated by 36 nucleotides
RR42_RS33635: RR42_RS33635 - hypothetical protein, at 2,972,349 to 2,973,035
_RS33635
RR42_RS33640: RR42_RS33640 - glutamate dehydrogenase, at 2,973,909 to 2,975,252
_RS33640
RR42_RS33645: RR42_RS33645 - pyridoxamine 5'-phosphate oxidase, at 2,975,641 to 2,976,291
_RS33645
RR42_RS33650: RR42_RS33650 - IclR family transcriptional regulator, at 2,977,489 to 2,978,259
_RS33650
RR42_RS33655: RR42_RS33655 - ABC transporter substrate-binding protein, at 2,978,296 to 2,979,270
_RS33655
Group
Condition
RR42
_RS33635
RR42
_RS33640
RR42
_RS33645
RR42
_RS33650
RR42
_RS33655
carbon source
Pimelic (C)
+0.0
+0.0
+0.1
-3.3
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.6
-0.1
-0.4
-2.0
+0.1
carbon source
Pimelic (C)
-0.1
-0.1
+0.1
-2.8
-0.1
carbon source
Disodium Glutarate (C)
-0.0
+0.0
-0.1
-2.5
+0.0
carbon source
Ethanol (C)
-0.3
-0.3
-0.1
-1.8
+0.2
carbon source
Disodium Glutarate (C)
+0.2
+0.5
+0.2
-2.6
-0.4
carbon source
Suberic (C)
-0.1
+0.2
-0.1
-1.8
-0.2
carbon source
Dodecandioic (C)
-0.0
+0.2
-0.3
-1.4
-0.4
carbon source
D-Lactate (C)
+0.0
-0.1
-0.2
-1.7
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.3
+0.2
+0.2
-2.4
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.1
-0.3
-0.2
-0.9
-0.1
carbon source
Ethanol (C)
+0.1
-0.2
+0.0
-1.5
+0.1
stress
R2A with Nickel (II) chloride 0.25 mM
-0.1
-0.4
+0.2
-1.2
-0.0
carbon source
adipate (C)
+0.1
+0.1
-0.2
-1.3
-0.0
nitrogen source
L-Isoleucine (N)
-0.0
-0.3
-0.3
-0.8
+0.1
carbon source
L-Glutamine (C)
-0.0
-0.1
+0.2
-1.4
+0.2
carbon source
L-Lactate (C)
+0.1
-0.1
-0.3
-0.9
+0.0
carbon source
L-Tryptophan (C)
-0.1
+0.2
+0.1
-1.4
+0.1
carbon source
L-Phenylalanine (C)
+0.1
-0.1
-0.1
-1.2
+0.2
carbon source
a-Ketoglutaric (C)
-0.1
+0.0
-0.0
-1.3
+0.3
nitrogen source
L-Leucine (N)
+0.1
-0.2
-0.1
-1.1
+0.1
stress
R2A with Cisplatin 0.001 mg/ml
+0.1
-0.1
+0.2
-1.0
-0.2
carbon source
L-Tryptophan (C)
+0.1
+0.0
+0.1
-1.3
+0.1
nitrogen source
L-Isoleucine (N)
+0.1
-0.1
-0.3
-0.9
+0.3
nitrogen source
nitrite (N)
+0.0
-0.0
+0.2
-1.3
+0.2
carbon source
L-Leucine (C)
-0.0
+0.1
+0.1
-1.1
+0.2
carbon source
Protocatechuic Acid (C)
+0.1
+0.7
-0.3
-1.3
+0.1
carbon source
pyruvate (C)
+0.0
+0.0
+0.1
-1.1
+0.3
stress
R2A with Vancomycin 0.5 mg/ml
+0.0
-0.2
+0.5
+0.7
-0.2
carbon source
L-Proline (C)
-0.0
-0.0
-0.1
+2.5
-0.0
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