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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS33625 and RR42_RS33630 are separated by 231 nucleotides
RR42_RS33630 and RR42_RS33635 are separated by 41 nucleotides
RR42_RS33635 and RR42_RS33640 are separated by 873 nucleotides
RR42_RS33640 and RR42_RS33645 are separated by 388 nucleotides
RR42_RS33625: RR42_RS33625 - ABC transporter permease, at 2,970,154 to 2,970,993
_RS33625
RR42_RS33630: RR42_RS33630 - porin, at 2,971,225 to 2,972,307
_RS33630
RR42_RS33635: RR42_RS33635 - hypothetical protein, at 2,972,349 to 2,973,035
_RS33635
RR42_RS33640: RR42_RS33640 - glutamate dehydrogenase, at 2,973,909 to 2,975,252
_RS33640
RR42_RS33645: RR42_RS33645 - pyridoxamine 5'-phosphate oxidase, at 2,975,641 to 2,976,291
_RS33645
Group
Condition
RR42
_RS33625
RR42
_RS33630
RR42
_RS33635
RR42
_RS33640
RR42
_RS33645
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
-0.0
-0.6
-0.1
-0.4
stress
R2A with Vancomycin 0.5 mg/ml
-0.1
+0.0
-0.4
-0.4
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.1
-0.2
-0.1
-0.3
-0.2
stress
R2A with Cisplatin 0.001 mg/ml
-0.2
-0.1
+0.0
-0.5
-0.1
carbon source
Ethanol (C)
-0.1
+0.0
-0.3
-0.3
-0.1
nitrogen source
L-Valine (N)
-0.1
-0.1
-0.1
-0.4
-0.1
carbon source
succinate (C)
-0.1
-0.1
+0.1
-0.4
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.2
+0.1
-0.0
-0.2
-0.3
stress
R2A with Cobalt chloride 0.5 mM
+0.1
-0.1
-0.3
-0.1
-0.2
carbon source
4-Hydroxybenzoic Acid (C)
-0.3
+0.1
-0.1
-0.2
+0.1
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.1
-0.1
+0.1
-0.5
-0.1
nitrogen source
L-Serine (N)
-0.2
-0.2
-0.2
-0.1
+0.2
stress
R2A with Nickel (II) chloride 0.35 mM
+0.2
-0.1
-0.1
-0.2
-0.3
stress
R2A with Nickel (II) chloride 0.25 mM
-0.0
-0.1
-0.1
-0.4
+0.2
nitrogen source
L-Isoleucine (N)
+0.2
+0.1
-0.0
-0.3
-0.3
carbon source
adipate (C)
-0.3
-0.1
-0.0
-0.2
+0.3
carbon source
Octanoic (C)
-0.2
-0.2
+0.1
+0.5
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
-0.0
-0.2
+0.1
+0.3
-0.2
carbon source
Protocatechuic Acid (C)
-0.2
-0.3
+0.1
+0.7
-0.3
carbon source
Protocatechuic Acid (C)
-0.0
-0.1
+0.1
+0.3
-0.2
stress
R2A with Cobalt chloride 0.3 mM
-0.2
+0.0
+0.1
-0.2
+0.4
carbon source
Octanoic (C)
-0.1
-0.2
-0.1
+0.6
+0.0
stress
R2A with nitrate 200 mM
-0.1
-0.1
+0.3
-0.2
+0.5
stress
R2A with Vancomycin 0.5 mg/ml
+0.1
-0.0
+0.0
-0.2
+0.5
stress
R2A with Bacitracin 0.5 mg/ml
+0.0
+0.2
-0.0
-0.1
+0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.4
+0.2
+0.3
+0.2
+0.2
stress
R2A with Lomefloxacin 0.001 mM
-0.1
+0.1
+0.3
+0.1
+0.2
temperature
R2A 37C
+0.2
+0.3
-0.1
+0.1
+0.2
carbon source
Disodium Glutarate (C)
-0.0
-0.1
+0.2
+0.5
+0.2
carbon source
D,L-Lactate (C)
+0.2
+0.0
+0.1
+0.3
+0.2
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