Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS33580 and RR42_RS33585 are separated by 290 nucleotidesRR42_RS33585 and RR42_RS33590 are separated by 104 nucleotidesRR42_RS33590 and RR42_RS33595 are separated by 11 nucleotidesRR42_RS33595 and RR42_RS33600 overlap by 8 nucleotides RR42_RS33580: RR42_RS33580 - 3-hydroxyacyl-CoA dehydrogenase, at 2,962,136 to 2,963,050 _RS33580 RR42_RS33585: RR42_RS33585 - 3-keto-5-aminohexanoate cleavage protein, at 2,963,341 to 2,964,273 _RS33585 RR42_RS33590: RR42_RS33590 - cyclase, at 2,964,378 to 2,965,136 _RS33590 RR42_RS33595: RR42_RS33595 - hypothetical protein, at 2,965,148 to 2,965,522 _RS33595 RR42_RS33600: RR42_RS33600 - oxidoreductase, at 2,965,515 to 2,966,303 _RS33600
Group Condition RR42_RS33580 RR42_RS33585 RR42_RS33590 RR42_RS33595 RR42_RS33600
lb LB -0.2 -0.2 -0.1 -0.8 -3.6
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.2 -0.3 -0.0 -0.7 -1.9
carbon source Protocatechuic Acid (C) +0.4 -0.1 +0.1 -0.0 -3.4
carbon source D,L-Lactate (C) -0.0 +0.1 -0.3 -0.8 -1.4
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL -0.4 -0.2 -0.4 -0.5 -1.0
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.2 +0.1 -0.1 -0.5 -1.8
stress R2A with Lomefloxacin 0.001 mM +0.1 -0.3 -0.5 -1.3 +0.4
carbon source Carbon source D,L-Lactate 10 mM -0.1 -0.0 -0.9 +0.0 -0.6
stress R2A with Lomefloxacin 0.00075 mM -0.2 -0.0 -0.5 -0.2 -0.7
stress R2A with Zinc 0.1 mM +0.2 +0.2 +0.1 -1.0 -0.9
carbon source Trisodium citrate (C) +0.2 -0.0 -0.1 -0.7 -0.7
nitrogen source L-Isoleucine (N) +0.1 -0.1 -0.0 -0.6 -0.8
carbon source Heptanoic (C) +0.1 +0.1 -0.2 -0.6 -0.7
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.1 +0.2 -0.2 -1.3 +0.1
nitrogen source L-Glutamine (N) +0.5 +0.1 -0.1 -0.3 -1.0
nitrogen source L-Phenylalanine (N) -0.2 -0.1 -0.0 +0.4 -0.8
stress R2A with Vancomycin 0.5 mg/ml +0.4 -0.0 +0.1 -0.6 -0.6
r2a R2A -0.1 -0.1 +0.3 -0.8 +0.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.1 +0.1 +0.4 +0.1 -1.2
carbon source L-Malic (C) -0.2 +0.0 -0.1 -0.7 +0.6
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.0 +0.3 +0.0 -1.1 +0.6
nitrogen source L-Tryptophan (N) +0.1 -0.0 +0.1 +0.7 -0.8
carbon source Azelaic (C) +0.1 +0.2 +0.0 -0.9 +0.7
nitrogen source nitrite (N) +0.3 -0.1 -0.3 -0.3 +0.6
stress R2A with Chlorite 4 mM +0.2 +0.2 +0.3 -0.6 +0.2
carbon source adipate (C) +0.4 +0.1 -0.1 -0.5 +0.4
stress R2A with Cobalt chloride 0.5 mM -0.2 -0.1 -0.1 -0.2 +1.1
stress R2A with nitrate 200 mM -0.0 -0.3 -0.1 +0.7 +0.4
carbon source adipate (C) -0.4 -0.0 +0.1 -0.2 +1.3
carbon source L-Proline (C) -0.1 +0.0 -0.3 +0.6 +0.6
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