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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS33575 and RR42_RS33580 are separated by 50 nucleotides
RR42_RS33580 and RR42_RS33585 are separated by 290 nucleotides
RR42_RS33585 and RR42_RS33590 are separated by 104 nucleotides
RR42_RS33590 and RR42_RS33595 are separated by 11 nucleotides
RR42_RS33575: RR42_RS33575 - hypothetical protein, at 2,961,252 to 2,962,085
_RS33575
RR42_RS33580: RR42_RS33580 - 3-hydroxyacyl-CoA dehydrogenase, at 2,962,136 to 2,963,050
_RS33580
RR42_RS33585: RR42_RS33585 - 3-keto-5-aminohexanoate cleavage protein, at 2,963,341 to 2,964,273
_RS33585
RR42_RS33590: RR42_RS33590 - cyclase, at 2,964,378 to 2,965,136
_RS33590
RR42_RS33595: RR42_RS33595 - hypothetical protein, at 2,965,148 to 2,965,522
_RS33595
Group
Condition
RR42
_RS33575
RR42
_RS33580
RR42
_RS33585
RR42
_RS33590
RR42
_RS33595
carbon source
Pimelic (C)
-4.8
-0.2
-0.0
+0.0
-0.3
carbon source
D-Lactate (C)
-2.9
-0.1
-0.0
-0.2
-0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-2.0
-0.4
-0.2
-0.4
-0.5
carbon source
adipate (C)
-3.0
-0.4
-0.0
+0.1
-0.2
carbon source
Pimelic (C)
-2.7
+0.1
+0.0
+0.1
-0.5
nitrogen source
nitrite (N)
-2.6
+0.3
-0.1
-0.3
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-1.6
-0.2
-0.3
-0.0
-0.7
nitrogen source
L-Isoleucine (N)
-2.1
+0.1
-0.1
-0.0
-0.6
carbon source
Heptanoic (C)
-1.9
+0.1
+0.1
-0.2
-0.6
lb
LB
-1.1
-0.2
-0.2
-0.1
-0.8
carbon source
L-Histidine (C)
-1.3
-0.3
-0.1
-0.1
-0.6
carbon source
a-Ketoglutaric (C)
-1.8
-0.0
+0.1
-0.1
-0.5
stress
R2A with Chloride 300 mM
-1.6
-0.4
-0.0
-0.1
-0.2
carbon source
adipate (C)
-2.3
+0.4
+0.1
-0.1
-0.5
carbon source
a-Ketoglutaric (C)
-2.2
+0.1
+0.0
-0.0
-0.2
carbon source
Disodium Glutarate (C)
-1.6
+0.2
+0.1
+0.0
-0.9
carbon source
Disodium Glutarate (C)
-2.5
-0.0
+0.0
+0.2
+0.1
nitrogen source
D-Alanine (N)
-2.9
+0.0
+0.1
+0.1
+0.5
carbon source
Protocatechuic Acid (C)
-1.8
+0.0
-0.1
+0.2
-0.4
carbon source
L-Proline (C)
-2.2
-0.1
+0.0
-0.3
+0.6
stress
R2A with sodium fluoride 100 mM
-2.0
+0.2
-0.1
-0.1
+0.0
carbon source
L-Malic (C)
-1.8
+0.2
-0.0
-0.1
-0.3
nitrogen source
L-Glutamine (N)
-1.8
+0.5
+0.1
-0.1
-0.3
carbon source
L-Alanine (C)
-1.8
-0.1
-0.0
-0.2
+0.5
nitrogen source
L-Lysine (N)
-2.3
+0.2
+0.1
+0.1
+0.3
stress
R2A with Lomefloxacin 0.001 mM
+0.4
+0.1
-0.3
-0.5
-1.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-1.6
+0.4
+0.0
-0.1
-0.3
nitrogen source
Glycine (N)
-2.0
+0.2
-0.0
+0.2
+0.2
stress
R2A with Nickel (II) chloride 0.25 mM
-1.7
+0.3
-0.0
+0.0
+0.4
nitrogen source
D-Alanine (N)
-1.5
+0.1
+0.0
+0.0
+0.8
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