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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS33565 and RR42_RS33570 are separated by 141 nucleotides
RR42_RS33570 and RR42_RS33575 are separated by 5424 nucleotides
RR42_RS33575 and RR42_RS33580 are separated by 50 nucleotides
RR42_RS33580 and RR42_RS33585 are separated by 290 nucleotides
RR42_RS33565: RR42_RS33565 - hypothetical protein, at 2,947,356 to 2,954,855
_RS33565
RR42_RS33570: RR42_RS33570 - sulfotransferase, at 2,954,997 to 2,955,827
_RS33570
RR42_RS33575: RR42_RS33575 - hypothetical protein, at 2,961,252 to 2,962,085
_RS33575
RR42_RS33580: RR42_RS33580 - 3-hydroxyacyl-CoA dehydrogenase, at 2,962,136 to 2,963,050
_RS33580
RR42_RS33585: RR42_RS33585 - 3-keto-5-aminohexanoate cleavage protein, at 2,963,341 to 2,964,273
_RS33585
Group
Condition
RR42
_RS33565
RR42
_RS33570
RR42
_RS33575
RR42
_RS33580
RR42
_RS33585
carbon source
Pimelic (C)
+0.0
-0.0
-4.8
-0.2
-0.0
carbon source
adipate (C)
-0.0
-0.1
-3.0
-0.4
-0.0
carbon source
Disodium Glutarate (C)
-0.1
-0.2
-2.5
-0.0
+0.0
carbon source
D-Lactate (C)
-0.0
+0.3
-2.9
-0.1
-0.0
nitrogen source
D-Alanine (N)
+0.1
+0.1
-2.9
+0.0
+0.1
carbon source
Pimelic (C)
+0.0
-0.0
-2.7
+0.1
+0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.0
+0.2
-2.0
-0.4
-0.2
carbon source
Protocatechuic Acid (C)
-0.1
-0.2
-1.8
+0.0
-0.1
nitrogen source
nitrite (N)
+0.1
+0.0
-2.6
+0.3
-0.1
nitrogen source
L-Isoleucine (N)
+0.0
-0.1
-2.1
+0.1
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.0
+0.0
-1.6
-0.2
-0.3
carbon source
L-Proline (C)
+0.0
+0.3
-2.2
-0.1
+0.0
stress
R2A with Chloride 300 mM
-0.0
+0.1
-1.6
-0.4
-0.0
carbon source
a-Ketoglutaric (C)
+0.0
+0.0
-2.2
+0.1
+0.0
carbon source
Carbon source Phenylacetic 2.5 mM
+0.0
-0.2
-1.8
-0.1
+0.1
carbon source
Heptanoic (C)
+0.0
-0.2
-1.9
+0.1
+0.1
nitrogen source
L-Lysine (N)
+0.0
+0.1
-2.3
+0.2
+0.1
stress
R2A with sodium fluoride 100 mM
+0.0
+0.1
-2.0
+0.2
-0.1
carbon source
L-Alanine (C)
+0.1
+0.1
-1.8
-0.1
-0.0
nitrogen source
Glycine (N)
+0.1
-0.1
-2.0
+0.2
-0.0
carbon source
Dodecandioic (C)
-0.0
-0.1
-1.8
+0.2
-0.1
carbon source
adipate (C)
-0.0
-0.0
-2.3
+0.4
+0.1
carbon source
Protocatechuic Acid (C)
-0.1
-0.4
-1.3
+0.4
-0.1
carbon source
L-Histidine (C)
-0.0
+0.3
-1.3
-0.3
-0.1
carbon source
L-Malic (C)
-0.0
+0.2
-1.8
+0.2
-0.0
carbon source
a-Ketoglutaric (C)
+0.2
+0.3
-1.8
-0.0
+0.1
carbon source
L-Tryptophan (C)
+0.0
+0.0
-1.7
+0.2
+0.0
nitrogen source
L-Glutamine (N)
-0.1
+0.1
-1.8
+0.5
+0.1
stress
R2A with Nickel (II) chloride 0.25 mM
+0.0
+0.1
-1.7
+0.3
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.0
+0.1
-1.6
+0.4
+0.0
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