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Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS32935 and RR42_RS32940 are separated by 279 nucleotides
RR42_RS32940 and RR42_RS32945 overlap by 8 nucleotides
RR42_RS32945 and RR42_RS32950 overlap by 35 nucleotides
RR42_RS32950 and RR42_RS32955 are separated by 128 nucleotides
RR42_RS32935: RR42_RS32935 - CopG family transcriptional regulator, at 2,788,218 to 2,788,436
_RS32935
RR42_RS32940: RR42_RS32940 - sulfite reductase, at 2,788,716 to 2,790,446
_RS32940
RR42_RS32945: RR42_RS32945 - hypothetical protein, at 2,790,439 to 2,791,023
_RS32945
RR42_RS32950: RR42_RS32950 - alpha/beta hydrolase, at 2,790,989 to 2,791,843
_RS32950
RR42_RS32955: RR42_RS32955 - MFS transporter, at 2,791,972 to 2,793,354
_RS32955
Group
Condition
RR42
_RS32935
RR42
_RS32940
RR42
_RS32945
RR42
_RS32950
RR42
_RS32955
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.6
-0.0
-0.2
-0.0
-0.4
carbon source
Azelaic (C)
-0.4
+0.0
+0.2
-0.6
-0.3
nitrogen source
D-Alanine (N)
-0.4
-0.2
+0.2
+0.0
-0.4
carbon source
Heptanoic (C)
-0.2
+0.2
-0.1
-0.4
-0.5
stress
R2A with Cobalt chloride 0.5 mM
+0.6
-0.1
-0.4
-0.2
-0.7
stress
R2A with Lomefloxacin 0.00075 mM
-0.6
-0.2
-0.3
+0.4
-0.0
carbon source
D,L-Lactate (C)
-0.4
-0.1
+0.1
-0.4
+0.1
carbon source
L-Asparagine (C)
-0.3
-0.3
+0.2
-0.2
-0.1
carbon source
adipate (C)
-0.5
-0.1
-0.0
-0.4
+0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.8
-0.0
-0.4
+0.5
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.1
-0.3
-0.0
+0.2
-0.5
nitrogen source
L-Leucine (N)
-0.6
-0.3
+0.3
-0.0
+0.2
carbon source
Suberic (C)
-0.3
+0.1
+0.4
-0.5
-0.1
r2a
R2A
-0.2
-0.1
-0.6
+0.3
+0.2
carbon source
Disodium Glutarate (C)
-0.3
+0.2
+0.2
-0.4
+0.1
carbon source
D-Gluconic Acid (C)
-0.3
-0.1
+0.7
-0.3
-0.1
carbon source
L-Tryptophan (C)
-0.4
-0.1
+0.4
-0.0
+0.1
carbon source
Heptanoic (C)
-0.2
+0.3
+0.2
-0.4
+0.0
carbon source
D-Lactate (C)
-0.5
+0.1
+0.2
+0.4
+0.1
lb
LB
-0.1
-0.6
+0.4
+0.4
+0.3
stress
R2A with copper (II) chloride 0.25 mM
+0.4
+0.2
-0.3
+0.3
+0.0
stress
R2A with Zinc 0.1 mM
+0.7
+0.1
-0.1
-0.1
+0.2
carbon source
L-Histidine (C)
-0.2
+0.1
+0.6
+0.1
+0.3
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.3
+0.1
+0.6
+0.2
-0.0
carbon source
L-Asparagine (C)
+0.5
-0.0
+0.4
+0.3
-0.1
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+0.2
+0.1
-0.0
+0.8
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.4
+0.2
+0.4
+0.1
+0.2
carbon source
D-Lactate (C)
+0.3
+0.2
+0.4
+0.3
+0.2
stress
R2A with A22 0.01 mg/ml
+0.6
+0.2
+0.3
+0.2
-0.0
stress
R2A with Lomefloxacin 0.001 mM
+1.8
+0.1
-0.3
+0.8
-0.9
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