Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS31745 and RR42_RS31750 are separated by 76 nucleotidesRR42_RS31750 and RR42_RS31755 are separated by 293 nucleotidesRR42_RS31755 and RR42_RS31760 are separated by 208 nucleotidesRR42_RS31760 and RR42_RS31765 are separated by 98 nucleotides RR42_RS31745: RR42_RS31745 - ABC transporter permease, at 2,498,453 to 2,499,202 _RS31745 RR42_RS31750: RR42_RS31750 - IclR family transcriptional regulator, at 2,499,279 to 2,500,046 _RS31750 RR42_RS31755: RR42_RS31755 - short-chain dehydrogenase, at 2,500,340 to 2,501,056 _RS31755 RR42_RS31760: RR42_RS31760 - IclR family transcriptional regulator, at 2,501,265 to 2,503,364 _RS31760 RR42_RS31765: RR42_RS31765 - membrane protein, at 2,503,463 to 2,504,341 _RS31765
Group Condition RR42_RS31745 RR42_RS31750 RR42_RS31755 RR42_RS31760 RR42_RS31765
stress R2A with Cobalt chloride 0.3 mM +0.4 -0.7 N.D. -1.6 -0.5
stress R2A with Cobalt chloride 0.5 mM -0.0 -0.8 N.D. -0.7 -0.1
stress R2A with Lomefloxacin 0.001 mM -0.3 -0.9 N.D. -0.1 +0.1
stress R2A with nitrate 150 mM +0.0 -0.4 N.D. -0.3 -0.4
lb LB -0.3 +0.2 N.D. -0.1 -0.8
carbon source Octanoic (C) -0.1 -0.8 N.D. -0.1 -0.0
carbon source Carbon source Phenylacetic 2.5 mM +0.1 -0.6 N.D. -0.0 -0.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.1 +0.2 N.D. -0.4 -0.7
stress R2A with Polymyxin B sulfate 0.005 mg/ml -0.1 +0.1 N.D. -0.5 -0.2
stress R2A with Vancomycin 0.5 mg/ml +0.0 -0.9 N.D. +0.0 +0.2
stress R2A with Chlorite 4 mM +0.1 -0.6 N.D. -0.2 +0.1
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.2 -0.6 N.D. -0.1 +0.4
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.0 +0.2 N.D. -0.6 -0.1
stress R2A with copper (II) chloride 0.25 mM +0.2 -0.7 N.D. -0.2 +0.2
nitrogen source nitrite (N) -0.2 +0.3 N.D. -0.3 -0.2
nitrogen source Glucuronamide (N) -0.0 +0.4 N.D. -0.1 -0.5
stress R2A with Paraquat dichloride 0.064 mg/ml +0.2 -0.7 N.D. +0.4 -0.1
carbon source L-Histidine (C) +0.0 +0.7 N.D. -0.1 -0.6
stress R2A with Zinc 0.1 mM +0.2 -0.5 N.D. +0.1 +0.3
stress R2A with Lomefloxacin 0.00075 mM +0.1 -0.5 N.D. +0.3 +0.1
stress R2A with Nickel (II) chloride 0.35 mM -0.1 -0.7 N.D. +0.0 +0.9
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.1 +0.2 N.D. -0.5 +0.5
carbon source Dodecandioic (C) +0.1 -0.2 N.D. -0.3 +0.6
nitrogen source L-Valine (N) +0.1 +0.6 N.D. +0.1 -0.3
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL -0.5 -0.4 N.D. +1.1 +0.3
nitrogen source L-Serine (N) +0.2 +0.8 N.D. -0.2 -0.1
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.3 -0.2 N.D. -0.1 +0.8
nitrogen source L-Lysine (N) +0.1 +0.3 N.D. +0.1 +0.4
carbon source L-Tryptophan (C) +0.2 +0.8 N.D. -0.0 +0.4
stress R2A with D-Cycloserine 0.5 mg/ml -0.3 -0.3 N.D. +1.8 +0.4
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