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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS31710 and RR42_RS31715 are separated by 695 nucleotides
RR42_RS31715 and RR42_RS31720 are separated by 693 nucleotides
RR42_RS31720 and RR42_RS31725 overlap by 4 nucleotides
RR42_RS31725 and RR42_RS31730 are separated by 41 nucleotides
RR42_RS31710: RR42_RS31710 - HxlR family transcriptional regulator, at 2,492,216 to 2,492,722
_RS31710
RR42_RS31715: RR42_RS31715 - hypothetical protein, at 2,493,418 to 2,493,747
_RS31715
RR42_RS31720: RR42_RS31720 - transcriptional regulator, at 2,494,441 to 2,494,734
_RS31720
RR42_RS31725: RR42_RS31725 - regulator, at 2,494,731 to 2,496,032
_RS31725
RR42_RS31730: RR42_RS31730 - formimidoylglutamase, at 2,496,074 to 2,497,015
_RS31730
Group
Condition
RR42
_RS31710
RR42
_RS31715
RR42
_RS31720
RR42
_RS31725
RR42
_RS31730
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-1.0
-0.6
N.D.
-0.2
-0.0
carbon source
Dodecandioic (C)
-1.7
+0.0
N.D.
+0.1
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
-1.6
+0.1
N.D.
-0.1
-0.2
carbon source
Octanoic (C)
-1.4
-0.2
N.D.
-0.1
+0.1
carbon source
Carbon source Phenylacetic 2.5 mM
-0.6
-0.2
N.D.
-0.1
-0.3
temperature
R2A 23C
-0.5
-0.5
N.D.
-0.2
-0.1
carbon source
L-Proline (C)
-0.9
-0.3
N.D.
+0.2
-0.3
carbon source
Pimelic (C)
-1.0
-0.0
N.D.
-0.2
-0.1
carbon source
L-Histidine (C)
-0.7
-0.5
N.D.
+0.1
-0.2
nitrogen source
L-Valine (N)
-0.8
-0.4
N.D.
-0.1
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.4
-0.7
N.D.
-0.3
+0.2
carbon source
4-Hydroxybenzoic Acid (C)
-1.4
-0.1
N.D.
+0.1
+0.2
carbon source
Dodecandioic (C)
-1.3
+0.3
N.D.
+0.1
-0.2
stress
R2A with Vancomycin 0.5 mg/ml
-0.6
-0.6
N.D.
+0.4
-0.1
nitrogen source
nitrite (N)
-1.6
+0.7
N.D.
+0.1
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.8
-0.4
N.D.
+0.3
+0.3
carbon source
Pimelic (C)
-1.0
+0.3
N.D.
+0.2
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.1
-0.9
N.D.
+0.1
+0.2
carbon source
L-Tryptophan (C)
-0.9
+0.5
N.D.
+0.1
-0.0
stress
R2A with Cobalt chloride 0.5 mM
-0.7
+0.5
N.D.
-0.0
-0.0
nitrogen source
L-Leucine (N)
-0.6
+0.4
N.D.
-0.2
+0.1
carbon source
L-Leucine (C)
-0.7
+0.4
N.D.
+0.2
-0.0
nitrogen source
Glucuronamide (N)
-0.4
+0.8
N.D.
+0.0
-0.2
nitrogen source
L-Serine (N)
-0.5
+0.8
N.D.
-0.0
-0.0
nitrogen source
L-Phenylalanine (N)
-0.6
+1.1
N.D.
-0.1
-0.1
nitrogen source
D-Alanine (N)
-0.4
+1.0
N.D.
-0.1
+0.1
carbon source
adipate (C)
+1.2
-0.1
N.D.
+0.1
-0.2
carbon source
adipate (C)
+1.4
+0.2
N.D.
+0.1
-0.2
carbon source
Protocatechuic Acid (C)
+5.3
-0.2
N.D.
-0.4
-0.2
carbon source
Protocatechuic Acid (C)
+5.4
-0.1
N.D.
+0.1
-0.1
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