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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS31685 and RR42_RS31690 are separated by 226 nucleotides
RR42_RS31690 and RR42_RS31695 are separated by 63 nucleotides
RR42_RS31695 and RR42_RS31700 are separated by 46 nucleotides
RR42_RS31700 and RR42_RS31705 are separated by 8 nucleotides
RR42_RS31685: RR42_RS31685 - Asp/Glu/hydantoin racemase, at 2,488,467 to 2,489,087
_RS31685
RR42_RS31690: RR42_RS31690 - 4-oxalocrotonate tautomerase, at 2,489,314 to 2,489,727
_RS31690
RR42_RS31695: RR42_RS31695 - hypothetical protein, at 2,489,791 to 2,490,201
_RS31695
RR42_RS31700: RR42_RS31700 - esterase, at 2,490,248 to 2,491,141
_RS31700
RR42_RS31705: RR42_RS31705 - MBL fold metallo-hydrolase, at 2,491,150 to 2,492,133
_RS31705
Group
Condition
RR42
_RS31685
RR42
_RS31690
RR42
_RS31695
RR42
_RS31700
RR42
_RS31705
stress
R2A with Nickel (II) chloride 0.35 mM
-0.4
-0.7
-0.6
-0.8
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-1.6
-0.5
+0.1
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.3
-0.3
+0.0
-0.3
-1.0
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.5
-0.5
-0.5
+0.2
+0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.6
-0.3
-0.9
-0.1
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.8
-0.4
+0.5
+0.2
-0.3
carbon source
L-Asparagine (C)
+0.2
-0.6
-0.3
-0.2
+0.4
nitrogen source
L-Valine (N)
+0.4
-0.3
-0.6
-0.2
+0.1
nitrogen source
L-Glutamine (N)
-0.1
+0.3
-0.2
-0.6
+0.2
carbon source
Suberic (C)
+0.1
-0.3
-0.6
+0.0
+0.5
carbon source
Valeric (C)
+0.3
+0.3
-0.8
-0.1
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.3
-0.6
+0.2
+0.2
-0.4
nitrogen source
D-Alanine (N)
+0.2
+0.6
-0.9
-0.1
+0.1
carbon source
D-Lactate (C)
+0.5
-0.2
-0.2
-0.4
+0.3
carbon source
L-Lactate (C)
+0.2
+0.2
-0.6
-0.1
+0.4
stress
R2A with Vancomycin 0.5 mg/ml
-0.2
+0.8
-0.4
-0.1
-0.1
lb
LB
-0.2
+0.6
-0.4
-0.3
+0.5
carbon source
propionate (C)
+0.4
+0.3
-0.4
-0.3
+0.3
carbon source
succinate (C)
-0.2
+0.1
+0.5
-0.4
+0.3
stress
R2A with Zinc 0.1 mM
-0.3
+0.5
+0.4
-0.5
+0.3
nitrogen source
L-Tryptophan (N)
+0.3
-0.4
+0.6
-0.2
+0.1
stress
R2A with nitrate 150 mM
-0.3
+0.2
+0.5
-0.1
+0.5
carbon source
D,L-Lactate (C)
+0.4
+0.1
-0.5
+0.1
+0.7
carbon source
Disodium Glutarate (C)
+0.1
+0.2
+0.4
-0.3
+0.5
stress
R2A with Cobalt chloride 0.3 mM
-0.5
+0.4
+1.0
-0.0
+0.1
stress
R2A with Lomefloxacin 0.001 mM
+0.6
+0.3
+0.4
-0.5
+0.2
temperature
R2A 37C
+0.5
+0.1
+0.8
+0.4
-0.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.3
+0.2
+1.1
-0.0
+0.6
carbon source
Protocatechuic Acid (C)
+3.5
+3.5
+5.4
+2.9
+3.8
carbon source
Protocatechuic Acid (C)
+3.1
+4.6
+7.0
+3.2
+3.7
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