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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS31405 and RR42_RS31410 are separated by 1384 nucleotides
RR42_RS31410 and RR42_RS31415 are separated by 663 nucleotides
RR42_RS31415 and RR42_RS31420 are separated by 34 nucleotides
RR42_RS31420 and RR42_RS31425 are separated by 470 nucleotides
RR42_RS31405: RR42_RS31405 - hypothetical protein, at 2,422,278 to 2,422,463
_RS31405
RR42_RS31410: RR42_RS31410 - phospholipase, at 2,423,848 to 2,425,116
_RS31410
RR42_RS31415: RR42_RS31415 - histidine kinase, at 2,425,780 to 2,431,278
_RS31415
RR42_RS31420: RR42_RS31420 - LuxR family transcriptional regulator, at 2,431,313 to 2,431,966
_RS31420
RR42_RS31425: RR42_RS31425 - chloroperoxidase, at 2,432,437 to 2,433,123
_RS31425
Group
Condition
RR42
_RS31405
RR42
_RS31410
RR42
_RS31415
RR42
_RS31420
RR42
_RS31425
lb
LB
N.D.
-0.4
+0.0
-1.0
-0.4
carbon source
Carbon source D,L-Lactate 10 mM
N.D.
-0.1
+0.1
-0.3
-1.3
stress
R2A with Lomefloxacin 0.001 mM
N.D.
-0.5
-0.1
-0.4
-0.2
nitrogen source
L-Isoleucine (N)
N.D.
+0.0
-0.0
-0.5
-0.5
carbon source
Octanoic (C)
N.D.
-0.0
+0.0
-0.7
-0.2
stress
R2A with Chlorite 4 mM
N.D.
+0.1
-0.1
-0.3
-0.7
carbon source
adipate (C)
N.D.
+0.1
+0.0
-0.4
-0.6
carbon source
Azelaic (C)
N.D.
+0.1
+0.0
-0.5
-0.5
stress
R2A with nitrate 150 mM
N.D.
+0.1
-0.1
-0.4
-0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
-0.2
-0.2
+0.2
-0.6
carbon source
D,L-Lactate (C)
N.D.
-0.1
-0.0
-0.7
+0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
N.D.
+0.0
-0.2
+0.2
-0.7
stress
R2A with Lomefloxacin 0.00075 mM
N.D.
-0.1
-0.2
+0.2
-0.5
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
N.D.
+0.1
+0.1
-0.1
-0.7
stress
R2A with Chloride 300 mM
N.D.
-0.1
+0.1
-0.0
-0.7
carbon source
L-Alanine (C)
N.D.
-0.0
-0.0
-0.7
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
-0.0
-0.0
+0.5
-0.5
carbon source
D-Gluconic Acid (C)
N.D.
-0.0
-0.1
-0.5
+0.6
stress
R2A with Chloride 300 mM
N.D.
+0.0
-0.1
-0.4
+0.4
carbon source
Hexanoic (C)
N.D.
+0.1
-0.1
-0.3
+0.4
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
+0.1
-0.1
-0.3
+0.4
carbon source
Disodium Glutarate (C)
N.D.
-0.0
-0.1
-0.3
+0.7
stress
R2A with Dimethyl Sulfoxide 5 vol%
N.D.
+0.1
+0.1
+0.5
-0.3
carbon source
propionate (C)
N.D.
-0.1
+0.1
-0.2
+0.7
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
-0.2
-0.0
+0.1
+0.6
carbon source
Heptanoic (C)
N.D.
-0.2
-0.1
-0.1
+1.1
stress
R2A with Cobalt chloride 0.5 mM
N.D.
-0.2
-0.1
+0.3
+0.8
carbon source
Disodium Glutarate (C)
N.D.
-0.1
-0.1
-0.1
+1.2
carbon source
Suberic (C)
N.D.
+0.2
+0.1
+0.0
+0.8
stress
R2A with Paraquat dichloride 0.064 mg/ml
N.D.
+0.1
+0.0
+0.4
+0.7
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