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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS31390 and RR42_RS31395 are separated by 371 nucleotides
RR42_RS31395 and RR42_RS31400 are separated by 36 nucleotides
RR42_RS31400 and RR42_RS31405 are separated by 387 nucleotides
RR42_RS31405 and RR42_RS31410 are separated by 1384 nucleotides
RR42_RS31390: RR42_RS31390 - 2-dehydropantoate 2-reductase, at 2,418,937 to 2,419,911
_RS31390
RR42_RS31395: RR42_RS31395 - GntR family transcriptional regulator, at 2,420,283 to 2,420,975
_RS31395
RR42_RS31400: RR42_RS31400 - GntR family transcriptional regulator, at 2,421,012 to 2,421,890
_RS31400
RR42_RS31405: RR42_RS31405 - hypothetical protein, at 2,422,278 to 2,422,463
_RS31405
RR42_RS31410: RR42_RS31410 - phospholipase, at 2,423,848 to 2,425,116
_RS31410
Group
Condition
RR42
_RS31390
RR42
_RS31395
RR42
_RS31400
RR42
_RS31405
RR42
_RS31410
stress
R2A with Cobalt chloride 0.5 mM
-0.3
-0.4
+0.1
N.D.
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.3
-0.4
+0.0
N.D.
+0.0
carbon source
Protocatechuic Acid (C)
+0.2
-0.6
-0.2
N.D.
-0.2
stress
R2A with Lomefloxacin 0.001 mM
-0.5
+0.4
-0.1
N.D.
-0.5
nitrogen source
nitrite (N)
+0.2
-0.4
-0.1
N.D.
-0.3
lb
LB
+0.3
-0.5
+0.0
N.D.
-0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.5
-0.2
+0.1
N.D.
+0.2
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.3
-0.2
+0.1
N.D.
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-0.4
+0.2
N.D.
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.4
+0.3
+0.1
N.D.
-0.2
carbon source
propionate (C)
+0.2
-0.2
+0.1
N.D.
-0.2
carbon source
L-Lactate (C)
-0.4
+0.1
-0.0
N.D.
+0.2
stress
R2A with D-Cycloserine 0.01 mg/ml
-0.1
+0.3
+0.0
N.D.
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.3
+0.3
+0.0
N.D.
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
-0.3
+0.2
+0.1
N.D.
+0.2
carbon source
Disodium Glutarate (C)
+0.5
-0.2
-0.0
N.D.
-0.1
carbon source
adipate (C)
+0.3
+0.1
-0.3
N.D.
+0.1
stress
R2A with copper (II) chloride 0.25 mM
+0.2
-0.3
+0.1
N.D.
+0.2
carbon source
Octanoic (C)
+0.1
+0.4
-0.2
N.D.
-0.0
carbon source
L-Malic (C)
+0.3
+0.1
+0.2
N.D.
-0.2
carbon source
Azelaic (C)
+0.3
+0.3
-0.2
N.D.
+0.0
carbon source
Dodecandioic (C)
+0.4
+0.3
-0.1
N.D.
-0.1
stress
R2A with Cephalothin 0.25 mg/ml
+0.1
+0.5
+0.1
N.D.
-0.2
carbon source
L-Histidine (C)
+0.6
+0.1
+0.0
N.D.
-0.1
carbon source
Heptanoic (C)
+0.4
+0.5
-0.0
N.D.
-0.2
nitrogen source
Glucuronamide (N)
+0.3
+0.3
-0.0
N.D.
+0.1
carbon source
Heptanoic (C)
+0.2
+0.2
+0.1
N.D.
+0.1
carbon source
succinate (C)
+0.2
+0.4
+0.1
N.D.
+0.1
carbon source
Hexanoic (C)
+0.3
+0.5
+0.1
N.D.
-0.1
nitrogen source
casaminos (N)
+0.2
+0.6
+0.1
N.D.
+0.0
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