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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS30950 and RR42_RS30955 are separated by 179 nucleotides
RR42_RS30955 and RR42_RS30960 are separated by 28 nucleotides
RR42_RS30960 and RR42_RS30965 are separated by 156 nucleotides
RR42_RS30965 and RR42_RS30970 are separated by 87 nucleotides
RR42_RS30950: RR42_RS30950 - cation transporter, at 2,325,973 to 2,329,098
_RS30950
RR42_RS30955: RR42_RS30955 - histidine kinase, at 2,329,278 to 2,330,720
_RS30955
RR42_RS30960: RR42_RS30960 - transcriptional regulator, at 2,330,749 to 2,331,423
_RS30960
RR42_RS30965: RR42_RS30965 - hypothetical protein, at 2,331,580 to 2,332,125
_RS30965
RR42_RS30970: RR42_RS30970 - hypothetical protein, at 2,332,213 to 2,332,866
_RS30970
Group
Condition
RR42
_RS30950
RR42
_RS30955
RR42
_RS30960
RR42
_RS30965
RR42
_RS30970
stress
R2A with copper (II) chloride 0.25 mM
+0.3
-0.9
-2.0
-2.5
-0.5
stress
R2A with Nickel (II) chloride 0.25 mM
-0.4
-1.4
-2.3
-0.1
+0.2
stress
R2A with Nickel (II) chloride 0.35 mM
+0.1
-1.2
-2.0
-0.4
+0.3
stress
R2A with Zinc 0.1 mM
-4.1
+1.3
+0.1
-0.2
-0.0
stress
R2A with Cobalt chloride 0.5 mM
-3.4
+0.8
-0.6
+0.4
-0.1
stress
R2A with Nickel (II) chloride 0.25 mM
-0.1
-0.7
-2.1
-0.0
+0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.0
-0.5
-2.1
-0.1
+0.2
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.8
-0.6
+0.0
+0.1
-0.3
r2a
R2A
-0.8
-0.5
-0.1
+0.0
-0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.2
+0.2
-2.2
+0.3
+0.1
carbon source
Suberic (C)
-0.7
+0.2
-0.1
-0.1
-0.4
carbon source
L-Proline (C)
-0.0
-0.6
+0.0
+0.4
-0.5
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.1
+0.6
-0.2
-1.0
-0.2
stress
R2A with Cisplatin 0.001 mg/ml
-0.2
-0.8
-0.1
+0.6
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
+0.5
-0.1
-0.8
-0.3
carbon source
pyruvate (C)
+0.1
-0.7
+0.1
-0.4
+0.4
carbon source
Hexanoic (C)
-0.4
+0.6
-0.2
+0.3
-0.5
carbon source
Ethanol (C)
+0.1
-0.6
+0.2
+0.5
-0.4
carbon source
Azelaic (C)
-0.4
+0.2
-0.0
+0.6
-0.4
carbon source
Valeric (C)
-0.3
+0.7
-0.0
+0.2
-0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.3
+0.7
+0.1
-0.6
-0.2
carbon source
Heptanoic (C)
-0.2
+0.2
+0.2
+0.8
-0.5
lb
LB
+1.5
-0.2
-0.3
-0.6
-0.0
stress
R2A with Lomefloxacin 0.001 mM
+0.1
-0.7
+0.1
+1.1
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.0
+0.6
-0.1
+0.8
-0.1
nitrogen source
L-Isoleucine (N)
+0.3
-0.1
+0.1
+0.8
+0.4
carbon source
Protocatechuic Acid (C)
+0.9
+1.6
-0.2
+0.0
-0.5
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.9
+0.1
+0.1
+0.2
+0.6
stress
R2A with Cobalt chloride 0.3 mM
-0.8
+2.1
-0.1
+1.4
+0.3
carbon source
Protocatechuic Acid (C)
+0.5
+2.0
-0.1
+0.5
+0.1
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