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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS30135 and RR42_RS30140 are separated by 145 nucleotides
RR42_RS30140 and RR42_RS30145 overlap by 4 nucleotides
RR42_RS30145 and RR42_RS30150 are separated by 62 nucleotides
RR42_RS30150 and RR42_RS30155 are separated by 277 nucleotides
RR42_RS30135: RR42_RS30135 - sulfatase, at 2,133,081 to 2,134,601
_RS30135
RR42_RS30140: RR42_RS30140 - gluconolaconase, at 2,134,747 to 2,135,625
_RS30140
RR42_RS30145: RR42_RS30145 - 3-oxoacyl-ACP reductase, at 2,135,622 to 2,136,389
_RS30145
RR42_RS30150: RR42_RS30150 - arylsulfatase, at 2,136,452 to 2,137,915
_RS30150
RR42_RS30155: RR42_RS30155 - sulfatase, at 2,138,193 to 2,140,001
_RS30155
Group
Condition
RR42
_RS30135
RR42
_RS30140
RR42
_RS30145
RR42
_RS30150
RR42
_RS30155
stress
R2A with Cisplatin 0.001 mg/ml
-0.2
-0.4
-0.3
+0.1
-0.1
stress
R2A with Cobalt chloride 0.3 mM
-0.0
-0.6
-0.1
-0.3
+0.2
carbon source
Protocatechuic Acid (C)
+0.1
-0.2
-0.4
-0.1
-0.3
stress
R2A with Cobalt chloride 0.5 mM
-0.5
-0.5
+0.1
-0.0
+0.0
stress
R2A with Chloride 300 mM
-0.1
+0.2
-0.3
-0.2
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.3
+0.1
-0.2
+0.1
-0.2
carbon source
Valeric (C)
-0.3
+0.2
-0.4
+0.2
-0.3
nitrogen source
D-Alanine (N)
-0.2
+0.4
-0.3
-0.1
-0.2
stress
R2A with nitrate 200 mM
-0.3
-0.3
+0.2
+0.1
-0.1
carbon source
Azelaic (C)
-0.0
+0.3
-0.5
+0.1
-0.2
stress
R2A with Lomefloxacin 0.001 mM
-0.4
-0.1
+0.4
-0.3
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
+0.4
-0.3
-0.0
-0.1
nitrogen source
Glucuronamide (N)
-0.1
+0.3
-0.4
+0.2
-0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.1
+0.3
-0.5
-0.1
-0.0
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.2
-0.2
+0.2
+0.2
-0.1
nitrogen source
L-Tryptophan (N)
+0.0
+0.4
-0.4
+0.1
-0.2
nitrogen source
Glycine (N)
-0.2
+0.4
-0.3
-0.0
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.3
+0.4
+0.4
-0.4
-0.1
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
-0.2
-0.1
+0.3
+0.3
nitrogen source
L-Glutamine (N)
-0.1
+0.7
-0.5
+0.2
-0.1
carbon source
Azelaic (C)
-0.1
+0.5
-0.2
+0.2
-0.1
lb
LB
+0.2
+0.1
+0.7
-0.5
-0.3
nitrogen source
L-Phenylalanine (N)
+0.0
+0.5
-0.2
+0.1
-0.1
nitrogen source
L-Valine (N)
-0.1
+0.7
-0.1
+0.0
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.4
-0.1
+0.2
-0.3
+0.2
carbon source
L-Glutamine (C)
+0.3
-0.3
+0.1
+0.2
+0.1
carbon source
L-Threonine (C)
-0.3
+0.3
+0.3
+0.2
-0.1
nitrogen source
L-Lysine (N)
+0.2
-0.3
+0.2
+0.1
+0.3
stress
R2A with Cephalothin 0.25 mg/ml
-0.3
+0.3
+0.2
+0.1
+0.2
stress
R2A with Sisomicin 0.035 mg/ml
-0.2
+0.4
+0.1
+0.3
+0.2
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RR42_RS30145
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