Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS29140 and RR42_RS29145 are separated by 133 nucleotidesRR42_RS29145 and RR42_RS29150 are separated by 219 nucleotidesRR42_RS29150 and RR42_RS29155 are separated by 90 nucleotidesRR42_RS29155 and RR42_RS29160 are separated by 202 nucleotides RR42_RS29140: RR42_RS29140 - thiamine pyrophosphate-binding protein, at 1,893,649 to 1,895,325 _RS29140 RR42_RS29145: RR42_RS29145 - cytidine deaminase, at 1,895,459 to 1,895,941 _RS29145 RR42_RS29150: RR42_RS29150 - IclR family transcriptional regulator, at 1,896,161 to 1,896,955 _RS29150 RR42_RS29155: RR42_RS29155 - long-chain fatty acid--CoA ligase, at 1,897,046 to 1,898,521 _RS29155 RR42_RS29160: RR42_RS29160 - chemotaxis protein, at 1,898,724 to 1,900,328 _RS29160
Group Condition RR42_RS29140 RR42_RS29145 RR42_RS29150 RR42_RS29155 RR42_RS29160
carbon source Pimelic (C) -0.2 -0.6 -1.2 +0.0 -0.0
carbon source Pimelic (C) -0.1 -0.5 -1.0 -0.2 -0.0
carbon source Protocatechuic Acid (C) +0.1 -0.8 -0.5 -0.1 -0.3
carbon source Carbon source Phenylacetic 2.5 mM -0.0 -0.3 -0.5 -0.2 -0.2
carbon source Disodium Glutarate (C) -0.2 -0.4 -0.3 -0.3 -0.0
carbon source Protocatechuic Acid (C) -0.3 -0.0 +0.0 -0.4 -0.3
carbon source Disodium Glutarate (C) -0.0 -0.3 -0.3 -0.2 -0.2
carbon source propionate (C) -0.2 -0.3 -0.2 -0.2 +0.0
stress R2A with D-Cycloserine 0.5 mg/ml -0.0 -0.3 +0.0 -0.5 -0.1
carbon source Azelaic (C) -0.1 -0.1 -0.6 +0.1 -0.2
carbon source D,L-Lactate (C) -0.1 -0.4 -0.2 -0.2 +0.0
carbon source L-Asparagine (C) -0.1 -0.2 +0.1 -0.2 -0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.1 -0.5 -0.1 +0.1 +0.1
carbon source Azelaic (C) +0.1 -0.3 -0.4 +0.2 -0.1
stress R2A with Vancomycin 0.5 mg/ml -0.3 +0.4 -0.0 -0.2 -0.2
nitrogen source L-Leucine (N) +0.2 +0.2 -0.4 -0.0 -0.3
nitrogen source L-Valine (N) +0.2 -0.2 +0.2 -0.1 -0.3
carbon source adipate (C) +0.3 -0.3 +0.2 -0.2 -0.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.3 -0.3 -0.2 -0.2 +0.3
carbon source adipate (C) +0.5 -0.4 +0.2 -0.3 -0.1
carbon source L-Lactate (C) +0.1 -0.5 +0.1 -0.0 +0.2
nitrogen source L-Valine (N) +0.1 -0.3 +0.1 +0.3 -0.2
stress R2A with Chlorite 4 mM +0.1 +0.1 -0.3 -0.1 +0.3
nitrogen source L-Glutamine (N) +0.0 +0.1 +0.1 +0.4 -0.4
nitrogen source L-Phenylalanine (N) -0.0 +0.0 +0.2 +0.3 -0.3
stress R2A with Lomefloxacin 0.001 mM -0.3 +0.2 +0.6 -0.2 +0.0
lb LB +0.1 -0.1 +0.5 -0.1 +0.1
stress R2A with nitrate 200 mM +0.2 +0.1 +0.4 -0.1 +0.1
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.2 -0.1 +0.3 +0.1 +0.3
stress R2A with Nickel (II) chloride 0.25 mM +0.0 +0.5 +0.3 +0.2 -0.1
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